Os12g0145400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os12g0145400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.87 | 0.412 | 9.61 | 2.94 | 0.158 | -2.12 | -0.042 | -2.13 | 0.346 | 6.7 | 0.17 | 1473 | -- | -- |
| 78.63 | 0.413 | 9.61 | 2.79 | 0.181 | -1.6 | -0.0468 | -- | 0.353 | 6.01 | 0.1667 | 1493 | -- | -- |
| 76.79 | 0.408 | 9.61 | 2.93 | 0.163 | -2.09 | -- | -1.98 | 0.347 | 6.13 | 0.1696 | 1480 | -- | -- |
| 78.62 | 0.413 | 9.61 | 2.79 | 0.18 | -1.59 | -- | -- | 0.353 | 5.93 | 0.17 | 1493 | -- | -- |
| 78.11 | 0.412 | 9.61 | 2.95 | -- | -2.14 | -- | -2.16 | 0.343 | -- | 0.17 | 1477 | -- | -- |
| 103.78 | 0.478 | 9.61 | 3.2 | 0.243 | -- | 0.085 | -- | 0.493 | 9.19 | -- | -- | -- | -- |
| 103.81 | 0.477 | 9.61 | 3.2 | 0.243 | -- | -- | -- | 0.493 | 9.16 | -- | -- | -- | -- |
| 80.09 | 0.417 | 9.62 | 2.81 | -- | -1.57 | -- | -- | 0.369 | -- | 0.1731 | 1483 | -- | -- |
| 192.77 | 0.647 | 9.61 | -- | 0.447 | -2.03 | -- | -- | 0.356 | 5.9 | 0.03 | 46520 | -- | -- |
| 107.23 | 0.484 | 9.61 | 3.2 | -- | -- | -- | -- | 0.495 | -- | -- | -- | -- | -- |
| 374.33 | 0.905 | 9.69 | -- | 0.253 | -- | -- | -- | 0.137 | 8.19 | -- | -- | -- | -- |
| 137.67 | 0.546 | 9.84 | -- | -- | -2.42 | -- | -- | -0.527 | -- | 0.009327 | 47520 | -- | -- |
| 377.85 | 0.907 | 9.69 | -- | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.14 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 2 | 77.50 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 6 | 78.23 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 7 | 78.28 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 9 | 78.37 | wind | 5 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 12 | 78.62 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 13 | 78.80 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 15 | 78.91 | radiation | 10 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 17 | 78.92 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 18 | 78.93 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 21 | 78.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 22 | 78.95 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 25 | 78.97 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 27 | 78.98 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 35 | 79.08 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 40 | 79.21 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 43 | 79.23 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 45 | 79.24 | radiation | 30 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 50 | 79.28 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 52 | 79.29 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 54 | 79.30 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 57 | 79.31 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 58 | 79.32 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 59 | 79.33 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 60 | 79.34 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 67 | 79.37 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 75 | 79.42 | humidity | 70 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 86 | 79.46 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 91 | 79.46 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 94 | 79.47 | humidity | 70 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 112 | 79.52 | humidity | 70 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 127 | 79.52 | humidity | 70 | 43200 | < th | dose independent | rect. | 5 | 14 |
| 142 | 79.54 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 160 | 79.54 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 175 | 79.57 | radiation | 20 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 179 | 79.57 | radiation | 20 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 182 | 79.57 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 184 | 79.58 | humidity | 70 | 43200 | < th | dose independent | sin | 22 | NA |
| 232 | 79.62 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 233 | 79.63 | radiation | 40 | 43200 | > th | dose independent | sin | 21 | NA |
| 235 | 79.63 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 11 |
| 240 | 79.64 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 243 | 79.64 | radiation | 10 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 286 | 79.67 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 291 | 79.68 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 301 | 79.68 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 312 | 79.70 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 456 | 79.70 | radiation | 40 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 493 | 79.73 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 524 | 79.74 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 17 |
| 536 | 79.75 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 538 | 79.75 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 14 |
| 542 | 79.75 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 598 | 79.78 | radiation | 10 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 631 | 79.79 | radiation | 20 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 665 | 79.81 | humidity | 50 | 43200 | > th | dose independent | sin | 15 | NA |
| 740 | 79.85 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 782 | 79.88 | radiation | 20 | 43200 | > th | dose independent | sin | 10 | NA |
| 801 | 79.89 | radiation | 30 | 43200 | < th | dose dependent | sin | 4 | NA |
| 819 | 79.90 | humidity | 70 | 43200 | > th | dose independent | sin | 22 | NA |
| 821 | 79.90 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 840 | 79.90 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 841 | 79.90 | radiation | 30 | 43200 | < th | dose dependent | rect. | 5 | 6 |
| 885 | 79.92 | radiation | 30 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 962 | 79.95 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 978 | 79.96 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 7 |