Os12g0145100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wali7 protein (Fragment).
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Os12g0145100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Wali7 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.79 | 0.533 | 15.3 | -1.08 | 3.34 | 1.93 | -1.07 | -5.04 | -0.297 | 12.1 | 22.97 | 1024 | -- | -- |
| 140.82 | 0.553 | 15.2 | 0.16 | 3.3 | 1.54 | -0.512 | -- | 0.0297 | 12 | 21.96 | 964 | -- | -- |
| 133.24 | 0.538 | 15.3 | -0.925 | 3.34 | 1.88 | -- | -4.18 | -0.246 | 12.1 | 23 | 1041 | -- | -- |
| 141.92 | 0.555 | 15.2 | 0.138 | 3.32 | 1.57 | -- | -- | 0.0347 | 12 | 22.39 | 945 | -- | -- |
| 443.18 | 0.98 | 15.4 | -0.806 | -- | 3.73 | -- | -3.76 | -0.478 | -- | 20.6 | 3 | -- | -- |
| 202.98 | 0.668 | 15.1 | 0.617 | 2.95 | -- | -0.775 | -- | 0.32 | 12.2 | -- | -- | -- | -- |
| 205.58 | 0.671 | 15.1 | 0.586 | 2.95 | -- | -- | -- | 0.316 | 12.2 | -- | -- | -- | -- |
| 456.26 | 0.995 | 15.3 | -0.285 | -- | 3.84 | -- | -- | -0.33 | -- | 17.9 | 3 | -- | -- |
| 142.37 | 0.556 | 15.2 | -- | 3.32 | 1.62 | -- | -- | -0.00368 | 12 | 21.65 | 943 | -- | -- |
| 754.71 | 1.28 | 15.2 | 0.491 | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
| 214.64 | 0.685 | 15.2 | -- | 2.95 | -- | -- | -- | 0.251 | 12.2 | -- | -- | -- | -- |
| 458.1 | 0.997 | 15.3 | -- | -- | 3.78 | -- | -- | -0.29 | -- | 18 | 2 | -- | -- |
| 761.06 | 1.29 | 15.2 | -- | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.69 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 11 |
| 2 | 124.77 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 5 |
| 5 | 125.78 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 10 | 126.98 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 17 | 129.44 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 15 |
| 23 | 129.84 | radiation | 1 | 720 | < th | dose dependent | sin | 14 | NA |
| 25 | 130.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 28 | 130.38 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 31 | 130.67 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 2 |
| 34 | 130.87 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 36 | 130.94 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 43 | 131.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 45 | 131.30 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 11 |
| 50 | 131.74 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 5 |
| 62 | 132.32 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 66 | 132.39 | radiation | 1 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 69 | 132.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 6 |
| 73 | 132.56 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 10 |
| 90 | 133.06 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 13 |
| 91 | 133.09 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 104 | 133.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 105 | 133.67 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 148 | 134.06 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 19 |
| 162 | 134.21 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 210 | 134.73 | radiation | 1 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 239 | 135.15 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 250 | 135.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 254 | 135.30 | radiation | 1 | 720 | < th | dose independent | sin | 15 | NA |
| 264 | 135.36 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 267 | 135.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 273 | 135.43 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 4 |
| 274 | 135.43 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 290 | 135.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 20 |
| 291 | 135.63 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 13 |
| 298 | 135.65 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 305 | 135.67 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 21 |
| 308 | 135.70 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 343 | 135.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 19 |
| 344 | 135.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 375 | 135.95 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 410 | 136.02 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 412 | 136.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 460 | 136.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 508 | 136.44 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 510 | 136.46 | radiation | 1 | 720 | > th | dose independent | sin | 14 | NA |
| 528 | 136.60 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 22 |
| 535 | 136.63 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 545 | 136.69 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 618 | 137.16 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 623 | 137.20 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 627 | 137.23 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 643 | 137.34 | radiation | 1 | 720 | > th | dose independent | rect. | 12 | 7 |
| 721 | 137.71 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 734 | 137.78 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 747 | 137.84 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 800 | 138.10 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 822 | 138.17 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 864 | 138.40 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 866 | 138.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 882 | 138.51 | radiation | 1 | 720 | > th | dose independent | rect. | 11 | 20 |
| 890 | 138.58 | wind | 7 | 43200 | < th | dose independent | sin | 20 | NA |
| 946 | 138.79 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 14 |
| 978 | 138.93 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 11 |
| 1000 | 139.02 | wind | 5 | 43200 | > th | dose dependent | sin | 19 | NA |