Os12g0142900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0142900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.49 | 0.246 | 12.1 | -0.00134 | 0.643 | 4.04 | 0.0987 | -9.01 | -0.077 | 18.7 | 50.04 | 377 | -- | -- |
| 31.9 | 0.263 | 12.1 | 0.202 | 0.756 | 0.332 | 0.405 | -- | -0.0891 | 18.8 | 48.52 | 321 | -- | -- |
| 27.51 | 0.244 | 12.1 | -0.00714 | 0.643 | 4.11 | -- | -9.15 | -0.0769 | 18.7 | 50 | 378 | -- | -- |
| 28.89 | 0.25 | 12.1 | 0.156 | 0.646 | 0.621 | -- | -- | -0.0712 | 18.7 | 55.99 | 479 | -- | -- |
| 46.24 | 0.317 | 12.1 | -0.101 | -- | 4.57 | -- | -9.35 | -0.0652 | -- | 51.13 | 382 | -- | -- |
| 32.14 | 0.266 | 12.1 | 0.206 | 0.759 | -- | 0.381 | -- | -0.106 | 18.7 | -- | -- | -- | -- |
| 32.5 | 0.267 | 12.1 | 0.201 | 0.761 | -- | -- | -- | -0.105 | 18.7 | -- | -- | -- | -- |
| 37.91 | 0.287 | 12.1 | 0.159 | -- | 0.946 | -- | -- | -0.134 | -- | 93.94 | 551 | -- | -- |
| 29.31 | 0.252 | 12.1 | -- | 0.643 | 0.678 | -- | -- | -0.0873 | 18.7 | 55.46 | 485 | -- | -- |
| 62.69 | 0.37 | 12.1 | 0.183 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 33.56 | 0.271 | 12.1 | -- | 0.758 | -- | -- | -- | -0.127 | 18.7 | -- | -- | -- | -- |
| 38.3 | 0.288 | 12.1 | -- | -- | 0.917 | -- | -- | -0.109 | -- | 85 | 545 | -- | -- |
| 63.57 | 0.372 | 12.1 | -- | -- | -- | -- | -- | -0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.00 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 19 |
| 11 | 25.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 52 | 26.12 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 6 | 10 |
| 57 | 26.21 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 59 | 26.24 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 15 |
| 193 | 27.11 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 16 | 16 |
| 217 | 27.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 20 |
| 221 | 27.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 235 | 27.33 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 256 | 27.40 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 15 |
| 261 | 27.41 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 290 | 27.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 15 |
| 302 | 27.49 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 2 |
| 321 | 27.54 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 11 |
| 325 | 27.55 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 353 | 27.60 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 15 | 6 |
| 380 | 27.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 7 |
| 385 | 27.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 422 | 27.70 | humidity | 50.0 | 270 | > th | dose independent | sin | 12 | NA |
| 427 | 27.71 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 5 |
| 441 | 27.73 | humidity | 80.0 | 90 | < th | dose independent | rect. | 16 | 16 |
| 442 | 27.73 | humidity | 80.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 488 | 27.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 490 | 27.80 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 517 | 27.83 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 3 |
| 519 | 27.83 | humidity | 90.0 | 90 | < th | dose independent | rect. | 16 | 5 |
| 532 | 27.83 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 17 | 6 |
| 552 | 27.85 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 21 | 19 |
| 564 | 27.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 7 |
| 569 | 27.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 7 |
| 580 | 27.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 595 | 27.91 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 600 | 27.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 7 |
| 629 | 27.96 | humidity | 80.0 | 10 | < th | dose independent | rect. | 17 | 15 |
| 635 | 27.97 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 643 | 27.98 | humidity | 70.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 679 | 28.02 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 5 |
| 680 | 28.02 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 7 |
| 684 | 28.02 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 16 | 5 |
| 685 | 28.02 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 5 |
| 688 | 28.02 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 694 | 28.03 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 695 | 28.03 | wind | 7.0 | 90 | < th | dose independent | rect. | 16 | 5 |
| 705 | 28.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 7 |
| 707 | 28.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 708 | 28.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 17 |
| 715 | 28.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 738 | 28.06 | temperature | 20.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 742 | 28.06 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 746 | 28.07 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 758 | 28.08 | wind | 5.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 759 | 28.08 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 770 | 28.09 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 811 | 28.12 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 812 | 28.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 19 |
| 820 | 28.13 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 843 | 28.14 | humidity | 50.0 | 720 | < th | dose independent | rect. | 15 | 2 |
| 848 | 28.14 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 5 |
| 893 | 28.16 | radiation | 40.0 | 90 | < th | dose independent | rect. | 16 | 19 |
| 907 | 28.17 | wind | 1.0 | 90 | > th | dose independent | rect. | 16 | 5 |
| 912 | 28.17 | humidity | 50.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 915 | 28.17 | humidity | 50.0 | 270 | < th | dose dependent | sin | 12 | NA |
| 921 | 28.18 | humidity | 70.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 937 | 28.18 | temperature | 15.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 939 | 28.18 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 947 | 28.19 | temperature | 25.0 | 270 | > th | dose independent | rect. | 9 | 5 |
| 982 | 28.20 | humidity | 50.0 | 270 | < th | dose independent | sin | 12 | NA |
| 986 | 28.20 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 998 | 28.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 7 |