Os12g0139600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to L-Galactono-1,4-lactone dehydrogenase.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0139600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to L-Galactono-1,4-lactone dehydrogenase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.78 | 0.248 | 9.94 | -0.392 | 0.576 | -0.537 | -0.681 | -0.231 | -0.431 | 22.4 | 20 | 82 | -- | -- |
| 27.86 | 0.246 | 9.93 | -0.394 | 0.597 | -0.564 | -0.862 | -- | -0.425 | 22.6 | 20 | 80 | -- | -- |
| 28.33 | 0.248 | 9.93 | -0.379 | 0.549 | -0.502 | -- | -0.756 | -0.427 | 22.2 | 21.18 | 77 | -- | -- |
| 31.11 | 0.26 | 9.93 | -0.36 | 0.577 | -0.534 | -- | -- | -0.429 | 22.3 | 20.66 | 77 | -- | -- |
| 34.08 | 0.272 | 9.92 | -0.319 | -- | -0.446 | -- | -0.404 | -0.441 | -- | 18.34 | 676 | -- | -- |
| 35.94 | 0.281 | 9.92 | -0.335 | 0.323 | -- | 0.345 | -- | -0.394 | 17.2 | -- | -- | -- | -- |
| 35.95 | 0.281 | 9.92 | -0.337 | 0.335 | -- | -- | -- | -0.393 | 18 | -- | -- | -- | -- |
| 33.48 | 0.27 | 9.92 | -0.372 | -- | -0.469 | -- | -- | -0.448 | -- | 40 | 782 | -- | -- |
| 34.46 | 0.273 | 9.92 | -- | 0.557 | -0.498 | -- | -- | -0.396 | 22 | 19.98 | 66 | -- | -- |
| 41.76 | 0.302 | 9.91 | -0.347 | -- | -- | -- | -- | -0.401 | -- | -- | -- | -- | -- |
| 38.94 | 0.292 | 9.91 | -- | 0.34 | -- | -- | -- | -0.356 | 17.9 | -- | -- | -- | -- |
| 37.2 | 0.284 | 9.91 | -- | -- | -0.458 | -- | -- | -0.404 | -- | 40 | 750 | -- | -- |
| 44.94 | 0.313 | 9.9 | -- | -- | -- | -- | -- | -0.362 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.46 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 8 | 25.58 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 11 | 25.61 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 14 | 25.64 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 20 | 25.66 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 25 | 25.70 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 48 | 25.85 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 58 | 25.89 | temperature | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 67 | 25.92 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 112 | 26.03 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 155 | 26.10 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 209 | 26.18 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 210 | 26.18 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 215 | 26.19 | temperature | 15 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 231 | 26.22 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 268 | 26.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 380 | 26.41 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 388 | 26.41 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 419 | 26.45 | temperature | 10 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 441 | 26.45 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 7 |
| 456 | 26.46 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 480 | 26.48 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 521 | 26.49 | temperature | 15 | 14400 | > th | dose dependent | rect. | 12 | 10 |
| 531 | 26.49 | temperature | 15 | 14400 | > th | dose dependent | rect. | 8 | 17 |
| 536 | 26.49 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 19 |
| 539 | 26.50 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 547 | 26.50 | temperature | 15 | 14400 | > th | dose dependent | sin | 19 | NA |
| 552 | 26.50 | temperature | 30 | 14400 | < th | dose dependent | sin | 23 | NA |
| 579 | 26.50 | temperature | 15 | 14400 | > th | dose dependent | rect. | 7 | 14 |
| 597 | 26.50 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 17 |
| 617 | 26.51 | temperature | 30 | 14400 | < th | dose dependent | sin | 20 | NA |
| 655 | 26.51 | temperature | 30 | 14400 | < th | dose dependent | rect. | 12 | 13 |
| 657 | 26.51 | temperature | 30 | 14400 | < th | dose dependent | rect. | 7 | 14 |
| 662 | 26.51 | temperature | 30 | 14400 | < th | dose dependent | rect. | 10 | 15 |
| 712 | 26.52 | temperature | 30 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 781 | 26.53 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 790 | 26.53 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 812 | 26.53 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 900 | 26.54 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 996 | 26.55 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 998 | 26.55 | temperature | 30 | 14400 | < th | dose dependent | no | NA | NA |