Os12g0139300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 90A1 (EC 1.14.-.-).
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Os12g0139300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450 90A1 (EC 1.14.-.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.07 | 0.41 | 8.66 | -0.229 | 0.416 | 0.72 | 1.16 | -0.857 | -0.537 | 16 | 0.1098 | 1436 | -- | -- |
| 76.39 | 0.407 | 8.66 | -0.3 | 0.414 | 0.952 | 1.13 | -- | -0.535 | 16 | 0.12 | 1439 | -- | -- |
| 79.85 | 0.416 | 8.66 | -0.217 | 0.417 | 0.784 | -- | -0.787 | -0.532 | 15.9 | 0.14 | 1445 | -- | -- |
| 80.08 | 0.417 | 8.66 | -0.283 | 0.424 | 0.979 | -- | -- | -0.533 | 16 | 0.1153 | 1441 | -- | -- |
| 89.12 | 0.44 | 8.66 | -0.274 | -- | 0.835 | -- | -0.409 | -0.534 | -- | 0.1607 | 1412 | -- | -- |
| 86.42 | 0.436 | 8.7 | -0.573 | 0.415 | -- | 1.22 | -- | -0.66 | 16 | -- | -- | -- | -- |
| 90.68 | 0.446 | 8.7 | -0.558 | 0.423 | -- | -- | -- | -0.653 | 16 | -- | -- | -- | -- |
| 89 | 0.439 | 8.66 | -0.294 | -- | 1 | -- | -- | -0.54 | -- | 0.1657 | 1412 | -- | -- |
| 81.83 | 0.421 | 8.66 | -- | 0.426 | 1.16 | -- | -- | -0.503 | 15.8 | 0.09 | 1445 | -- | -- |
| 100.43 | 0.468 | 8.7 | -0.575 | -- | -- | -- | -- | -0.665 | -- | -- | -- | -- | -- |
| 98.89 | 0.465 | 8.69 | -- | 0.434 | -- | -- | -- | -0.591 | 16 | -- | -- | -- | -- |
| 90.94 | 0.444 | 8.66 | -- | -- | 1.15 | -- | -- | -0.507 | -- | 0.0976 | 1412 | -- | -- |
| 109.16 | 0.488 | 8.68 | -- | -- | -- | -- | -- | -0.601 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 5 | 65.99 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 9 | 66.20 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 68 | 69.12 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 10 | 9 |
| 142 | 71.40 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 157 | 71.65 | humidity | 60.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 159 | 71.67 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 12 | 9 |
| 166 | 71.74 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 167 | 71.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 18 |
| 170 | 71.84 | humidity | 60.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 177 | 71.98 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 184 | 72.04 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 199 | 72.25 | humidity | 60.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 229 | 72.63 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 237 | 72.72 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 248 | 72.81 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 266 | 72.98 | wind | 7.0 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 283 | 73.13 | wind | 7.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 300 | 73.23 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 302 | 73.24 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 318 | 73.32 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 319 | 73.32 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 338 | 73.43 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 351 | 73.50 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 357 | 73.52 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 382 | 73.69 | radiation | 30.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 393 | 73.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 397 | 73.77 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 432 | 73.94 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 17 |
| 433 | 73.95 | radiation | 30.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 434 | 73.95 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 435 | 73.96 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 436 | 73.96 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 448 | 73.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 454 | 74.02 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 455 | 74.02 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 456 | 74.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 458 | 74.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 465 | 74.06 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 467 | 74.08 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 477 | 74.11 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 9 |
| 496 | 74.17 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 2 | 19 |
| 497 | 74.18 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 498 | 74.18 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 512 | 74.25 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 18 |
| 545 | 74.36 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 547 | 74.37 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 5 |
| 549 | 74.37 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 553 | 74.39 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 571 | 74.44 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 572 | 74.45 | temperature | 30.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 585 | 74.48 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 595 | 74.51 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 5 |
| 607 | 74.56 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 609 | 74.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 610 | 74.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 613 | 74.59 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 631 | 74.63 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 23 |
| 644 | 74.67 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 5 |
| 671 | 74.73 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 674 | 74.73 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 677 | 74.73 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 678 | 74.73 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 685 | 74.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 686 | 74.74 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 689 | 74.74 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 696 | 74.75 | wind | 9.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 697 | 74.75 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 704 | 74.77 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 20 |
| 708 | 74.78 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 18 |
| 714 | 74.79 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 718 | 74.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 720 | 74.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 736 | 74.84 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 739 | 74.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 750 | 74.88 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 5 |
| 753 | 74.88 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 758 | 74.89 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 760 | 74.89 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 772 | 74.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 774 | 74.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 2 |
| 787 | 74.93 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 792 | 74.94 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 2 |
| 794 | 74.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 797 | 74.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 800 | 74.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 801 | 74.95 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 803 | 74.95 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 809 | 74.95 | radiation | 10.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 810 | 74.95 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 818 | 74.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 846 | 74.97 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 14 |
| 862 | 75.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 863 | 75.00 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 870 | 75.01 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 16 |
| 891 | 75.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 896 | 75.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 7 |
| 903 | 75.07 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 904 | 75.07 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 905 | 75.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 919 | 75.09 | wind | 5.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 925 | 75.10 | radiation | 30.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 927 | 75.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 932 | 75.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 952 | 75.13 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 958 | 75.14 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 964 | 75.14 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 18 |
| 995 | 75.17 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 997 | 75.17 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 20 |