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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0137600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sulfotransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.17 (0.0334) R2 : 0.00958
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.148 (0.0703) R2dN8 : 0.0124 R2N8 : 0.00958
σ : 0.629
deviance : 181.35
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
147.63 0.571 3.3 -1.46 0.363 0.778 -0.67 -2.88 -0.2 2.16 24.23 1227 -- --
151.48 0.573 3.22 -0.821 0.37 0.813 -0.827 -- -0.0589 1.36 14.79 1316 -- --
148.75 0.568 3.29 -1.47 0.377 0.811 -- -3.21 -0.207 3.35 23.6 1084 -- --
153.5 0.577 3.21 -0.737 0.389 0.709 -- -- -0.0461 2.49 12.83 1218 -- --
155.86 0.581 3.3 -1.54 -- 0.934 -- -3.39 -0.226 -- 23.8 1119 -- --
159.41 0.592 3.19 -0.547 0.463 -- -0.78 -- 0.0763 1.96 -- -- -- --
161.65 0.595 3.18 -0.524 0.468 -- -- -- 0.0802 2.3 -- -- -- --
161.58 0.592 3.22 -0.766 -- 0.879 -- -- -0.0616 -- 14.45 1115 -- --
166 0.6 3.18 -- 0.412 0.378 -- -- 0.0825 2.38 15.46 1222 -- --
174.64 0.618 3.18 -0.504 -- -- -- -- 0.0916 -- -- -- -- --
168.89 0.608 3.17 -- 0.458 -- -- -- 0.139 2.28 -- -- -- --
173.56 0.614 3.18 -- -- 0.464 -- -- 0.0949 -- 24.1 1150 -- --
181.35 0.629 3.17 -- -- -- -- -- 0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 139.01 wind 1.0 90 < th dose independent rect. 4 1
2 139.85 wind 1.0 90 < th dose dependent rect. 4 1
3 141.16 wind 1.0 10 < th dose independent rect. 2 4
5 141.61 temperature 30.0 720 > th dose dependent rect. 18 1
23 142.18 humidity 90.0 90 > th dose independent rect. 4 1
24 142.39 wind 1.0 10 < th dose independent rect. 4 2
25 142.47 wind 3.0 10 < th dose dependent rect. 4 2
28 142.68 temperature 25.0 90 < th dose independent rect. 4 1
45 142.91 humidity 90.0 90 > th dose dependent rect. 4 1
47 143.08 temperature 20.0 90 > th dose independent rect. 4 1
50 143.28 temperature 20.0 90 > th dose dependent rect. 4 1
72 144.52 atmosphere 1015.0 90 < th dose dependent rect. 4 1
84 144.85 humidity 50.0 1440 < th dose independent rect. 16 1
91 144.99 humidity 50.0 1440 < th dose dependent rect. 16 1
97 145.14 temperature 15.0 90 > th dose independent rect. 5 23
109 145.39 temperature 30.0 720 > th dose independent rect. 18 1
129 145.55 humidity 70.0 720 < th dose independent rect. 18 2
150 145.80 temperature 25.0 1440 > th dose dependent rect. 15 1
152 145.84 humidity 70.0 720 < th dose dependent rect. 18 13
153 145.85 wind 9.0 90 < th dose independent rect. 5 23
154 145.85 humidity 70.0 720 < th dose dependent rect. 18 2
167 145.94 wind 3.0 10 < th dose dependent rect. 4 5
168 146.02 wind 5.0 90 < th dose independent rect. 4 1
176 146.12 temperature 25.0 720 > th dose dependent rect. 21 1
179 146.20 precipitation 0.1 90 < th dose independent rect. 4 1
180 146.20 precipitation 0.1 90 < th dose dependent rect. 4 1
182 146.22 atmosphere 1005.0 90 > th dose independent rect. 4 1
184 146.24 temperature 10.0 90 > th dose independent rect. 4 1
187 146.24 humidity 50.0 90 > th dose independent rect. 4 1
190 146.24 atmosphere 995.0 90 > th dose independent rect. 4 1
191 146.24 atmosphere 1010.0 90 < th dose independent rect. 4 1
193 146.24 radiation 20.0 90 < th dose independent rect. 4 1
197 146.24 radiation 20.0 90 < th dose dependent rect. 4 1
200 146.25 radiation 1.0 90 < th dose independent rect. 4 1
233 146.66 wind 3.0 10 < th dose dependent rect. 4 7
264 146.86 atmosphere 1005.0 90 > th dose independent rect. 3 3
265 146.86 radiation 1.0 270 < th dose dependent rect. 5 20
275 146.94 temperature 25.0 30 < th dose dependent rect. 4 1
294 147.06 humidity 50.0 1440 > th dose independent rect. 16 1
362 147.26 radiation 1.0 720 > th dose independent rect. 18 1
373 147.27 atmosphere 1005.0 10 > th dose independent rect. 4 2
395 147.33 temperature 25.0 1440 > th dose dependent rect. 13 11
431 147.43 temperature 10.0 270 > th dose dependent rect. 14 15
447 147.49 atmosphere 1005.0 270 > th dose independent rect. 24 6
454 147.51 atmosphere 1010.0 90 < th dose independent rect. 16 14
459 147.53 humidity 70.0 10 > th dose dependent rect. 4 2
460 147.53 atmosphere 1015.0 10 < th dose dependent rect. 4 2
483 147.61 humidity 80.0 10 > th dose independent rect. 4 2
484 147.61 atmosphere 1005.0 270 > th dose independent rect. 1 4
489 147.62 atmosphere 1015.0 720 < th dose dependent rect. 17 2
501 147.67 temperature 30.0 1440 < th dose independent rect. 18 5
514 147.70 temperature 25.0 270 > th dose independent rect. 14 6
536 147.76 wind 9.0 10 < th dose independent rect. 6 22
553 147.80 atmosphere 1005.0 720 < th dose independent rect. 17 1
562 147.83 temperature 30.0 1440 < th dose independent rect. 18 3
575 147.87 wind 9.0 270 < th dose independent rect. 5 10
576 147.87 temperature 25.0 1440 > th dose dependent sin 16 NA
584 147.88 wind 1.0 10 < th dose independent rect. 4 19
588 147.90 wind 1.0 10 < th dose independent sin 4 NA
599 147.94 precipitation 0.1 90 < th dose independent rect. 5 23
604 147.94 precipitation 0.1 90 < th dose dependent rect. 5 23
609 147.95 wind 1.0 90 < th dose dependent rect. 4 18
623 147.99 precipitation 0.1 10 < th dose independent rect. 4 2
625 147.99 precipitation 0.1 10 < th dose dependent rect. 4 2
649 148.06 wind 1.0 30 > th dose independent rect. 22 18
679 148.11 temperature 10.0 10 > th dose independent rect. 4 2
682 148.11 humidity 50.0 10 > th dose independent rect. 4 2
685 148.11 atmosphere 995.0 10 > th dose independent rect. 4 2
686 148.11 atmosphere 1010.0 10 < th dose independent rect. 4 2
688 148.11 radiation 20.0 10 < th dose independent rect. 4 2
691 148.11 temperature 10.0 10 > th dose independent rect. 6 22
695 148.12 atmosphere 1005.0 270 > th dose independent rect. 24 8
705 148.15 radiation 1.0 270 < th dose dependent rect. 9 16
720 148.20 radiation 40.0 10 < th dose dependent rect. 4 2
725 148.22 radiation 20.0 14400 < th dose independent rect. 5 1
735 148.25 temperature 15.0 10 > th dose independent rect. 16 14
736 148.25 temperature 15.0 90 > th dose independent rect. 16 14
739 148.26 atmosphere 1010.0 10 < th dose independent rect. 16 14
743 148.27 wind 9.0 270 < th dose independent rect. 9 15
747 148.28 temperature 30.0 1440 < th dose dependent rect. 15 1
748 148.29 temperature 30.0 1440 < th dose dependent rect. 13 3
761 148.30 radiation 1.0 270 < th dose dependent rect. 13 12
773 148.32 temperature 20.0 10 > th dose dependent rect. 2 4
782 148.33 radiation 40.0 270 < th dose independent rect. 14 15
786 148.34 temperature 10.0 270 > th dose independent rect. 5 10
787 148.34 atmosphere 1015.0 270 < th dose independent rect. 5 10
788 148.34 temperature 30.0 1440 < th dose independent rect. 18 13
795 148.35 precipitation 0.1 270 < th dose independent rect. 15 14
797 148.35 precipitation 0.1 270 < th dose dependent rect. 15 14
819 148.36 atmosphere 995.0 90 > th dose dependent rect. 19 8
831 148.38 precipitation 0.1 270 < th dose independent rect. 24 9
835 148.38 humidity 70.0 270 > th dose dependent rect. 22 2
837 148.38 precipitation 0.1 270 < th dose dependent rect. 24 9
842 148.39 temperature 30.0 90 < th dose dependent rect. 22 5
846 148.40 humidity 60.0 90 > th dose dependent rect. 22 5
848 148.41 temperature 30.0 1440 < th dose independent rect. 18 11
849 148.41 temperature 15.0 270 > th dose dependent rect. 14 6
850 148.41 temperature 10.0 10 > th dose dependent rect. 16 14
852 148.43 temperature 20.0 30 > th dose independent rect. 4 15
859 148.44 wind 1.0 270 > th dose independent rect. 9 15
860 148.44 atmosphere 1010.0 270 < th dose independent rect. 14 15
866 148.45 wind 7.0 270 < th dose independent rect. 24 9
873 148.47 precipitation 0.1 10 < th dose independent rect. 16 14
876 148.47 atmosphere 995.0 270 > th dose dependent rect. 19 5
877 148.47 precipitation 0.1 10 < th dose dependent rect. 16 14
885 148.49 radiation 20.0 90 < th dose independent rect. 15 15
886 148.49 atmosphere 995.0 90 > th dose independent rect. 3 16
887 148.49 atmosphere 995.0 90 > th dose dependent rect. 4 1
895 148.50 atmosphere 995.0 270 > th dose independent rect. 5 9
902 148.51 precipitation 0.1 270 < th dose independent rect. 5 10
903 148.51 temperature 30.0 270 < th dose dependent rect. 22 1
907 148.51 precipitation 0.1 270 < th dose dependent rect. 5 10
913 148.54 temperature 10.0 90 > th dose independent rect. 19 8
914 148.54 temperature 30.0 90 < th dose independent rect. 19 8
915 148.54 humidity 50.0 90 > th dose independent rect. 19 8
917 148.54 atmosphere 995.0 90 > th dose independent rect. 19 8
918 148.54 radiation 1.0 90 < th dose independent rect. 19 8
923 148.54 temperature 10.0 90 > th dose independent rect. 3 16
924 148.54 atmosphere 1015.0 90 < th dose independent rect. 3 16
928 148.54 radiation 1.0 90 < th dose dependent rect. 19 8
934 148.54 wind 1.0 90 < th dose dependent rect. 4 13
948 148.56 wind 9.0 90 < th dose independent rect. 19 8
952 148.56 wind 9.0 10 < th dose dependent rect. 16 14
967 148.59 radiation 1.0 270 < th dose independent rect. 5 20
985 148.62 humidity 70.0 720 > th dose independent rect. 18 6
989 148.62 temperature 30.0 270 < th dose independent rect. 24 9
997 148.62 atmosphere 1015.0 270 < th dose dependent rect. 14 6