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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0135800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.48 (0.0673) R2 : 0.0719
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.24 (0.51) R2dE : 0.0395 R2E : 0.017
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.646 (0.143) R2dN8 : 0.0549 R2N8 : 0.0324
σ : 1.26
deviance : 735.54
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 8.4
memory length : 898
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
727.8 1.27 3.42 -0.235 0.281 0.384 0.0768 -8.47 0.653 6.99 7.887 897 -- --
731.43 1.26 3.47 -0.0987 0.267 2.21 -0.0234 -- 0.637 8.22 8.419 893 -- --
727.53 1.26 3.42 -0.236 0.277 0.468 -- -8.32 0.659 6.89 8.011 878 -- --
731.09 1.26 3.48 -0.123 0.292 2.28 -- -- 0.634 7.54 8.4 893 -- --
731.7 1.26 3.44 -0.23 -- 0.464 -- -8.16 0.645 -- 8.051 892 -- --
759.15 1.29 3.51 -0.394 0.238 -- 0.372 -- 0.523 6.13 -- -- -- --
759.49 1.29 3.51 -0.39 0.24 -- -- -- 0.522 6.05 -- -- -- --
735.06 1.26 3.49 -0.14 -- 2.16 -- -- 0.629 -- 8.5 898 -- --
731.47 1.26 3.48 -- 0.278 2.29 -- -- 0.645 7.2 8.4 898 -- --
762.48 1.29 3.51 -0.384 -- -- -- -- 0.527 -- -- -- -- --
763.51 1.29 3.5 -- 0.235 -- -- -- 0.565 6.13 -- -- -- --
735.54 1.26 3.48 -- -- 2.24 -- -- 0.646 -- 8.4 898 -- --
766.36 1.29 3.5 -- -- -- -- -- 0.57 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 717.96 wind 7 270 < th dose independent rect. 10 23
3 721.98 wind 9 270 > th dose independent sin 10 NA
6 724.09 wind 5 90 < th dose independent rect. 13 20
7 724.25 radiation 10 1440 < th dose dependent rect. 9 1
9 724.80 wind 9 270 < th dose independent sin 10 NA
15 726.35 wind 9 720 < th dose independent rect. 3 15
17 726.54 radiation 10 1440 > th dose independent rect. 8 2
18 726.55 wind 9 270 > th dose independent rect. 17 18
23 726.90 radiation 10 1440 < th dose independent rect. 9 1
26 727.26 radiation 10 1440 < th dose dependent rect. 9 3
31 727.73 wind 7 270 > th dose dependent sin 10 NA
32 727.76 wind 9 720 < th dose independent rect. 6 17
35 728.06 wind 9 90 < th dose dependent rect. 11 23
41 729.32 wind 7 270 < th dose independent rect. 23 23
43 729.54 wind 7 270 > th dose dependent rect. 15 21
44 729.57 wind 7 720 < th dose independent rect. 20 22
46 729.62 wind 7 270 > th dose dependent rect. 16 19
49 729.69 wind 7 270 > th dose independent rect. 14 21
53 729.80 wind 9 270 > th dose independent rect. 16 20
55 729.87 wind 7 90 > th dose dependent rect. 1 8
57 729.87 wind 7 720 > th dose dependent rect. 19 22
70 730.36 wind 9 720 > th dose independent rect. 19 1
71 730.36 wind 9 720 > th dose dependent rect. 19 1
72 730.37 wind 7 270 < th dose independent rect. 12 10
73 730.38 wind 7 90 > th dose independent rect. 1 8
76 730.41 wind 9 720 < th dose independent rect. 11 7
98 731.03 wind 1 90 > th dose dependent rect. 9 17
99 731.04 wind 5 90 > th dose independent sin 9 NA
107 731.19 wind 5 90 < th dose independent sin 8 NA
122 731.52 wind 5 90 > th dose independent rect. 18 17
123 731.52 wind 7 720 > th dose dependent rect. 9 17
125 731.56 wind 3 4320 < th dose dependent rect. 2 3
127 731.57 wind 7 720 > th dose dependent rect. 9 15
147 731.79 wind 7 270 > th dose independent rect. 19 23
160 731.86 wind 7 720 < th dose independent rect. 10 14
170 731.91 wind 1 90 > th dose dependent rect. 9 21
212 732.15 wind 7 720 > th dose dependent rect. 1 23
219 732.18 wind 7 720 > th dose dependent rect. 9 8
223 732.22 wind 7 720 > th dose dependent no NA NA
236 732.30 wind 7 720 < th dose independent rect. 3 21
243 732.34 wind 3 4320 < th dose independent rect. 3 1
260 732.38 wind 7 270 > th dose independent rect. 10 19
287 732.49 wind 5 90 > th dose independent rect. 1 10
302 732.58 wind 7 720 > th dose dependent rect. 1 16
305 732.61 wind 7 270 > th dose independent rect. 21 23
312 732.63 wind 7 270 > th dose independent no NA NA
323 732.64 wind 7 720 > th dose dependent sin 22 NA
341 732.69 wind 7 270 < th dose independent no NA NA
361 732.79 wind 7 270 > th dose independent rect. 1 23
395 732.94 wind 5 90 > th dose independent rect. 23 12
417 733.05 wind 1 270 > th dose dependent rect. 7 20
521 733.22 wind 5 90 < th dose independent rect. 23 10
572 733.35 temperature 25 10 > th dose independent rect. 14 19
625 733.51 wind 3 4320 > th dose independent rect. 3 1
667 733.69 wind 7 10 < th dose independent rect. 23 23
676 733.73 wind 5 4320 < th dose dependent rect. 3 1
727 733.87 wind 1 1440 < th dose independent rect. 2 4
728 733.87 radiation 1 90 < th dose independent rect. 4 23
752 733.93 wind 1 1440 > th dose independent rect. 2 4
790 733.94 wind 9 720 > th dose independent rect. 1 16
814 734.02 wind 9 720 > th dose independent rect. 9 14
880 734.13 wind 9 720 > th dose independent rect. 9 8
902 734.16 wind 9 1440 > th dose independent rect. 10 1
926 734.22 wind 7 10 > th dose independent sin 9 NA
927 734.22 wind 9 720 > th dose independent sin 1 NA
931 734.22 temperature 25 10 > th dose independent rect. 12 21
937 734.24 wind 3 270 > th dose independent rect. 7 3
982 734.34 wind 9 720 > th dose dependent rect. 14 1
990 734.35 wind 9 720 < th dose independent sin 0 NA