Os12g0134600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os12g0134600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.86 | 0.546 | 5.69 | 2.45 | 1.32 | -1.25 | 0.508 | -1.4 | 0.222 | 5.89 | 0.9774 | 1473 | -- | -- |
| 135.81 | 0.543 | 5.7 | 2.34 | 1.32 | -0.907 | 0.599 | -- | 0.219 | 5.99 | 1.137 | 1467 | -- | -- |
| 135.44 | 0.542 | 5.69 | 2.45 | 1.33 | -1.28 | -- | -1.47 | 0.224 | 5.81 | 0.8597 | 1476 | -- | -- |
| 136.46 | 0.544 | 5.71 | 2.32 | 1.32 | -0.968 | -- | -- | 0.204 | 5.91 | 1.15 | 1469 | -- | -- |
| 224.52 | 0.698 | 5.7 | 2.44 | -- | -1.37 | -- | -1.61 | 0.273 | -- | 0.17 | 1463 | -- | -- |
| 145.18 | 0.565 | 5.68 | 2.53 | 1.33 | -- | 0.613 | -- | 0.321 | 6.17 | -- | -- | -- | -- |
| 146.1 | 0.566 | 5.68 | 2.53 | 1.33 | -- | -- | -- | 0.319 | 6.13 | -- | -- | -- | -- |
| 227.27 | 0.702 | 5.73 | 2.33 | -- | -1.03 | -- | -- | 0.225 | -- | 1.38 | 1463 | -- | -- |
| 261.11 | 0.753 | 5.7 | -- | 1.42 | -2.13 | -- | -- | 0.223 | 5.54 | 0.009997 | 1485 | -- | -- |
| 238.36 | 0.721 | 5.71 | 2.57 | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
| 315.12 | 0.83 | 5.75 | -- | 1.37 | -- | -- | -- | 0.0365 | 6.04 | -- | -- | -- | -- |
| 346.31 | 0.867 | 5.81 | -- | -- | -2.25 | -- | -- | -0.121 | -- | 0.003949 | 1457 | -- | -- |
| 412.59 | 0.948 | 5.77 | -- | -- | -- | -- | -- | 0.0632 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.23 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 2 | 125.24 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 5 | 125.64 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 6 | 125.74 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 7 | 125.76 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 8 | 125.77 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 9 | 125.82 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 12 | 125.90 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 24 | 126.19 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 33 | 126.67 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 42 | 126.86 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 44 | 126.90 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 68 | 127.35 | temperature | 15.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 70 | 127.37 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 19 |
| 83 | 127.50 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 99 | 127.60 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 22 |
| 115 | 127.69 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 141 | 127.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 170 | 128.01 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 180 | 128.07 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 185 | 128.09 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 190 | 128.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 191 | 128.10 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 205 | 128.16 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 222 | 128.24 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 223 | 128.24 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 224 | 128.24 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 228 | 128.26 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 236 | 128.31 | temperature | 15.0 | 14400 | < th | dose independent | no | NA | NA |
| 256 | 128.39 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 257 | 128.40 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 261 | 128.42 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 329 | 128.79 | temperature | 15.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 330 | 128.79 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 339 | 128.82 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 344 | 128.83 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 10 |
| 347 | 128.83 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 10 |
| 362 | 128.92 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 394 | 129.05 | radiation | 10.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 404 | 129.09 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 421 | 129.15 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 440 | 129.23 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 444 | 129.25 | wind | 7.0 | 720 | < th | dose independent | rect. | 19 | 11 |
| 445 | 129.25 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 2 |
| 468 | 129.33 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 500 | 129.45 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 522 | 129.52 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 524 | 129.52 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 534 | 129.54 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 657 | 129.89 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 19 | 4 |
| 668 | 129.91 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 690 | 129.97 | temperature | 15.0 | 14400 | > th | dose independent | no | NA | NA |
| 695 | 129.98 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 8 |
| 721 | 130.06 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 723 | 130.08 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 726 | 130.08 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 14 |
| 730 | 130.08 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 737 | 130.11 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 740 | 130.11 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 748 | 130.13 | temperature | 15.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 771 | 130.17 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 776 | 130.18 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 778 | 130.19 | temperature | 15.0 | 14400 | < th | dose dependent | no | NA | NA |
| 780 | 130.19 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 784 | 130.19 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 815 | 130.22 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 817 | 130.23 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 834 | 130.24 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 836 | 130.25 | wind | 5.0 | 4320 | > th | dose independent | rect. | 14 | 9 |
| 882 | 130.30 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 942 | 130.38 | radiation | 20.0 | 30 | < th | dose independent | sin | 9 | NA |
| 943 | 130.38 | wind | 5.0 | 4320 | < th | dose independent | rect. | 14 | 9 |
| 963 | 130.42 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 986 | 130.46 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 992 | 130.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 999 | 130.47 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 17 | 6 |