Os12g0133300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Major facilitator superfamily antiporter.
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Os12g0133300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Major facilitator superfamily antiporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 285.37 | 0.794 | 3.09 | -0.409 | 0.0759 | 2.16 | -0.424 | -11.2 | -0.16 | 9.31 | 999.8 | 758 | -- | -- |
| 295.24 | 0.806 | 2.98 | 0.197 | 0.051 | 0.216 | -0.332 | -- | -0.173 | 7.92 | 999.8 | 758 | -- | -- |
| 285.94 | 0.788 | 3.1 | -0.462 | 0.0749 | 2.29 | -- | -11.8 | -0.16 | 10.2 | 999.8 | 830 | -- | -- |
| 294.18 | 0.799 | 2.98 | 0.253 | 0.064 | 0.235 | -- | -- | -0.156 | 7.61 | 1002 | 118 | -- | -- |
| 286.28 | 0.788 | 3.1 | -0.474 | -- | 2.32 | -- | -12.1 | -0.162 | -- | 999.8 | 861 | -- | -- |
| 296.52 | 0.807 | 2.98 | 0.236 | 0.0513 | -- | -0.33 | -- | -0.187 | 7.9 | -- | -- | -- | -- |
| 296.84 | 0.807 | 2.98 | 0.227 | 0.0512 | -- | -- | -- | -0.187 | 8.13 | -- | -- | -- | -- |
| 294.15 | 0.799 | 2.97 | 0.197 | -- | 0.278 | -- | -- | -0.155 | -- | 1002 | 117 | -- | -- |
| 294.95 | 0.8 | 2.98 | -- | 0.0632 | 0.296 | -- | -- | -0.176 | 7.36 | 1002 | 117 | -- | -- |
| 296.99 | 0.805 | 2.98 | 0.227 | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
| 298.2 | 0.808 | 2.98 | -- | 0.0527 | -- | -- | -- | -0.212 | 7.82 | -- | -- | -- | -- |
| 295.17 | 0.8 | 2.98 | -- | -- | 0.293 | -- | -- | -0.175 | -- | 1002 | 117 | -- | -- |
| 298.35 | 0.806 | 2.99 | -- | -- | -- | -- | -- | -0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 272.72 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 18 | 272.72 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 35 | 274.92 | wind | 5.0 | 90 | > th | dose dependent | rect. | 24 | 9 |
| 36 | 275.21 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 10 |
| 43 | 278.13 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 48 | 278.15 | wind | 7.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 64 | 278.26 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 1 |
| 66 | 278.26 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 71 | 278.31 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 74 | 278.31 | wind | 5.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 82 | 278.43 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 97 | 279.27 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 106 | 279.88 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 120 | 280.47 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 11 |
| 124 | 280.47 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 11 |
| 186 | 282.93 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 187 | 282.94 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 197 | 283.17 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 198 | 283.18 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 233 | 283.73 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 3 |
| 254 | 284.63 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 255 | 284.69 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 10 |
| 258 | 284.77 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 23 | 23 |
| 261 | 284.93 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 14 | 23 |
| 262 | 284.96 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 2 | 14 |
| 270 | 285.03 | atmosphere | 1000.0 | 720 | > th | dose independent | sin | 3 | NA |
| 272 | 285.04 | atmosphere | 1000.0 | 720 | < th | dose independent | sin | 3 | NA |
| 285 | 285.09 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 313 | 285.25 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 24 | 17 |
| 328 | 285.30 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 16 | 22 |
| 332 | 285.32 | wind | 1.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 342 | 285.39 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 5 | 10 |
| 358 | 285.44 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 363 | 285.45 | atmosphere | 1000.0 | 720 | < th | dose independent | no | NA | NA |
| 377 | 285.47 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 10 | 4 |
| 387 | 285.50 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 9 | 23 |
| 391 | 285.51 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 399 | 285.52 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 6 | 23 |
| 412 | 285.57 | atmosphere | 1000.0 | 720 | > th | dose independent | no | NA | NA |
| 455 | 285.69 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 21 | 23 |
| 460 | 285.72 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 14 | 15 |
| 467 | 285.75 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 484 | 285.75 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 501 | 285.78 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 529 | 285.78 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 530 | 285.78 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 582 | 285.87 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 6 | 15 |
| 622 | 285.99 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 9 | 9 |
| 628 | 286.01 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 631 | 286.03 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 644 | 286.07 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 10 |
| 659 | 286.12 | atmosphere | 1000.0 | 720 | > th | dose independent | sin | 13 | NA |
| 666 | 286.15 | atmosphere | 1000.0 | 720 | < th | dose independent | sin | 13 | NA |
| 735 | 286.27 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 16 |
| 759 | 286.35 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 24 | 3 |
| 810 | 286.52 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 815 | 286.54 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 837 | 286.60 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 18 |
| 838 | 286.60 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 23 |
| 858 | 286.67 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 14 | 8 |
| 859 | 286.67 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 18 |
| 867 | 286.72 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 10 | 23 |
| 895 | 286.85 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 910 | 286.90 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 24 | 2 |
| 957 | 287.06 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 24 | 5 |
| 963 | 287.08 | humidity | 90.0 | 10 | > th | dose independent | rect. | 1 | 18 |
| 988 | 287.19 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 18 |
| 996 | 287.23 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 999 | 287.24 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 20 | 14 |