Os12g0125500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0125500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.74 | 0.628 | 7.74 | -2.62 | 1.32 | -1.82 | 1.54 | -1.7 | -0.126 | 7.19 | 71.03 | 1213 | -- | -- |
| 184.35 | 0.632 | 7.77 | -2.87 | 1.3 | -1.89 | 1.41 | -- | -0.209 | 7.05 | 71 | 1229 | -- | -- |
| 184.8 | 0.633 | 7.73 | -2.6 | 1.29 | -1.8 | -- | -1.57 | -0.126 | 7.15 | 71.22 | 1229 | -- | -- |
| 189.54 | 0.641 | 7.77 | -2.85 | 1.29 | -1.9 | -- | -- | -0.211 | 7.15 | 71 | 1229 | -- | -- |
| 266.42 | 0.76 | 7.77 | -2.57 | -- | -1.84 | -- | -1.47 | -0.106 | -- | 72.9 | 1303 | -- | -- |
| 308.36 | 0.823 | 7.71 | -2.48 | 1.33 | -- | 1.62 | -- | 0.0655 | 5.8 | -- | -- | -- | -- |
| 314.78 | 0.831 | 7.72 | -2.47 | 1.34 | -- | -- | -- | 0.0593 | 5.87 | -- | -- | -- | -- |
| 271.3 | 0.767 | 7.8 | -2.81 | -- | -1.92 | -- | -- | -0.175 | -- | 72.74 | 1303 | -- | -- |
| 380.61 | 0.909 | 7.69 | -- | 1.31 | -2.02 | -- | -- | 0.145 | 6.85 | 75 | 2696 | -- | -- |
| 408.02 | 0.944 | 7.74 | -2.42 | -- | -- | -- | -- | 0.0905 | -- | -- | -- | -- | -- |
| 474.99 | 1.02 | 7.66 | -- | 1.3 | -- | -- | -- | 0.334 | 5.96 | -- | -- | -- | -- |
| 451.97 | 0.99 | 7.67 | -- | -- | -2.41 | -- | -- | 0.193 | -- | 76 | 2755 | -- | -- |
| 563.13 | 1.11 | 7.68 | -- | -- | -- | -- | -- | 0.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.43 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 17 |
| 24 | 189.21 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 66 | 190.67 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 19 |
| 77 | 190.76 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 93 | 191.00 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 99 | 191.05 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 127 | 191.29 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 142 | 191.45 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 174 | 191.88 | humidity | 50 | 1440 | > th | dose dependent | sin | 23 | NA |
| 176 | 191.93 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 180 | 191.99 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 201 | 192.21 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 203 | 192.23 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 246 | 192.67 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 250 | 192.70 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 309 | 193.30 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 313 | 193.32 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 359 | 194.19 | humidity | 80 | 1440 | < th | dose dependent | sin | 15 | NA |
| 364 | 194.27 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 368 | 194.29 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 370 | 194.30 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 404 | 194.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 422 | 194.83 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 426 | 194.86 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 490 | 195.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 625 | 196.40 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 659 | 196.60 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 666 | 196.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 668 | 196.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 670 | 196.66 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 682 | 196.75 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 763 | 197.36 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 829 | 197.80 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 853 | 198.07 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 871 | 198.23 | humidity | 70 | 1440 | > th | dose independent | sin | 11 | NA |
| 874 | 198.26 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 879 | 198.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 899 | 198.32 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 901 | 198.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 937 | 198.40 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 948 | 198.43 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 951 | 198.43 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 958 | 198.46 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 960 | 198.49 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 991 | 198.76 | humidity | 70 | 1440 | < th | dose independent | sin | 16 | NA |