Os12g0125000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb factor.
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Os12g0125000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Myb factor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.65 | 0.228 | 2.84 | -0.111 | 0.0727 | -0.124 | -0.179 | 0.716 | -0.0105 | 10.2 | 58.98 | 1401 | -- | -- |
| 24.37 | 0.232 | 2.84 | -0.0259 | 0.0641 | -0.0779 | -0.222 | -- | 0.00782 | 8.11 | 58.98 | 1401 | -- | -- |
| 23.76 | 0.227 | 2.84 | -0.116 | 0.0724 | -0.128 | -- | 0.719 | -0.0107 | 10.5 | 59 | 1433 | -- | -- |
| 24.33 | 0.23 | 2.84 | -0.0196 | 0.121 | -0.147 | -- | -- | -0.013 | 10.7 | 86.93 | 872 | -- | -- |
| 24.07 | 0.229 | 2.84 | -0.118 | -- | -0.13 | -- | 0.735 | -0.0121 | -- | 58.99 | 1448 | -- | -- |
| 24.57 | 0.232 | 2.84 | -0.0258 | 0.0757 | -- | -0.185 | -- | 0.0113 | 10 | -- | -- | -- | -- |
| 24.69 | 0.233 | 2.84 | -0.0326 | 0.0765 | -- | -- | -- | 0.0112 | 10.6 | -- | -- | -- | -- |
| 24.75 | 0.233 | 2.84 | -0.0315 | -- | -0.08 | -- | -- | 0.00869 | -- | 58.99 | 1448 | -- | -- |
| 24.32 | 0.23 | 2.84 | -- | 0.131 | -0.156 | -- | -- | -0.012 | 10.3 | 86.86 | 848 | -- | -- |
| 25.05 | 0.234 | 2.84 | -0.034 | -- | -- | -- | -- | 0.0109 | -- | -- | -- | -- | -- |
| 24.72 | 0.233 | 2.83 | -- | 0.0767 | -- | -- | -- | 0.0149 | 10.6 | -- | -- | -- | -- |
| 24.77 | 0.233 | 2.84 | -- | -- | -0.0806 | -- | -- | 0.0122 | -- | 58.99 | 1448 | -- | -- |
| 25.08 | 0.234 | 2.84 | -- | -- | -- | -- | -- | 0.0146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.58 | humidity | 60 | 30 | < th | dose independent | rect. | 17 | 17 |
| 3 | 12.58 | humidity | 60 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 9 | 12.59 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 11 | 12.59 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 64 | 12.59 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 73 | 12.59 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 75 | 12.59 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 169 | 12.59 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 257 | 12.63 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 275 | 12.66 | humidity | 60 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 332 | 12.77 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 354 | 12.82 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 355 | 12.83 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 363 | 12.96 | radiation | 40 | 30 | > th | dose dependent | rect. | 14 | 20 |
| 364 | 12.97 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 661 | 14.43 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 731 | 14.71 | radiation | 40 | 10 | > th | dose independent | rect. | 14 | 20 |
| 745 | 14.77 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 917 | 15.59 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 956 | 15.88 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |
| 987 | 16.07 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |
| 988 | 16.09 | radiation | 40 | 10 | > th | dose independent | sin | 11 | NA |