Os12g0124100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Disease resistance gene analog PIC13 (Fragment).
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Os12g0124100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Disease resistance gene analog PIC13 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.35 | 0.52 | 5.61 | 0.975 | 0.676 | 0.67 | 0.62 | 1.14 | 0.919 | 4.76 | 71.02 | 4464 | -- | -- |
| 123.81 | 0.518 | 5.61 | 1.05 | 0.666 | 0.763 | 0.667 | -- | 0.955 | 4.78 | 71.43 | 4461 | -- | -- |
| 123.34 | 0.517 | 5.61 | 0.973 | 0.679 | 0.659 | -- | 1.21 | 0.915 | 4.79 | 71 | 4477 | -- | -- |
| 124.91 | 0.521 | 5.6 | 1.05 | 0.674 | 0.722 | -- | -- | 0.967 | 4.74 | 72.17 | 4436 | -- | -- |
| 142.13 | 0.558 | 5.65 | 1.1 | -- | 0.387 | -- | 0.379 | 0.842 | -- | 73.5 | 4797 | -- | -- |
| 131.79 | 0.538 | 5.64 | 1.05 | 0.691 | -- | 0.61 | -- | 0.827 | 4.7 | -- | -- | -- | -- |
| 132.76 | 0.54 | 5.64 | 1.05 | 0.696 | -- | -- | -- | 0.824 | 4.74 | -- | -- | -- | -- |
| 142.61 | 0.559 | 5.65 | 1.11 | -- | 0.398 | -- | -- | 0.838 | -- | 72.17 | 4436 | -- | -- |
| 151.59 | 0.573 | 5.61 | -- | 0.691 | 0.755 | -- | -- | 0.939 | 4.72 | 73 | 7358 | -- | -- |
| 158.4 | 0.588 | 5.65 | 1.08 | -- | -- | -- | -- | 0.842 | -- | -- | -- | -- | -- |
| 161.85 | 0.595 | 5.67 | -- | 0.715 | -- | -- | -- | 0.707 | 4.69 | -- | -- | -- | -- |
| 171.26 | 0.612 | 5.69 | -- | -- | 0.551 | -- | -- | 0.667 | -- | 65 | 7702 | -- | -- |
| 188.99 | 0.642 | 5.67 | -- | -- | -- | -- | -- | 0.723 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 3 | 117.50 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 5 | 117.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 8 | 117.82 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 10 | 117.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 11 | 117.89 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 12 | 117.91 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 15 | 118.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 18 | 118.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 22 | 118.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 24 | 118.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 41 | 118.28 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 61 | 118.39 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 13 |
| 82 | 118.47 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 92 | 118.52 | wind | 1.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 103 | 118.60 | wind | 1.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 128 | 118.73 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 184 | 119.05 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 232 | 119.34 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 234 | 119.34 | wind | 1.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 317 | 119.70 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 338 | 119.76 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 399 | 119.98 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 501 | 120.32 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 582 | 120.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 627 | 120.73 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 644 | 120.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 652 | 120.79 | wind | 1.0 | 14400 | < th | dose independent | rect. | 12 | 22 |
| 654 | 120.80 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 686 | 120.89 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 687 | 120.89 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 715 | 120.92 | wind | 1.0 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 724 | 120.95 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 731 | 120.96 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 17 |
| 736 | 120.97 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 5 | 8 |
| 759 | 121.00 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 792 | 121.09 | wind | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 813 | 121.10 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 815 | 121.10 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 818 | 121.11 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 828 | 121.13 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 20 |
| 845 | 121.18 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 848 | 121.19 | wind | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 873 | 121.22 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 5 | 7 |
| 888 | 121.25 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 890 | 121.25 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 891 | 121.25 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 943 | 121.30 | humidity | 70.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 946 | 121.30 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 967 | 121.32 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 12 | 20 |
| 970 | 121.33 | humidity | 50.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 980 | 121.34 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 992 | 121.35 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 8 | 4 |