Os12g0123900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0123900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.49 | 0.179 | 12.2 | -0.776 | 0.579 | -0.0849 | 0.0509 | -2.58 | -0.0343 | 4.99 | 29.23 | 2015 | -- | -- |
| 15.48 | 0.183 | 12.2 | -0.241 | 0.61 | -0.332 | 0.177 | -- | 0.0285 | 4.99 | 29.82 | 3170 | -- | -- |
| 14.49 | 0.177 | 12.2 | -0.78 | 0.58 | -0.083 | -- | -2.6 | -0.0354 | 5 | 29.24 | 2014 | -- | -- |
| 15.37 | 0.183 | 12.2 | -0.22 | 0.598 | -0.321 | -- | -- | 0.0806 | 5.06 | 29 | 4676 | -- | -- |
| 21.77 | 0.217 | 12.2 | -0.371 | -- | -0.613 | -- | -1.11 | 0.101 | -- | 28.3 | 433 | -- | -- |
| 19.39 | 0.206 | 12.2 | -0.325 | 0.598 | -- | 0.128 | -- | 0.0665 | 5.18 | -- | -- | -- | -- |
| 19.44 | 0.206 | 12.2 | -0.325 | 0.599 | -- | -- | -- | 0.0659 | 5.18 | -- | -- | -- | -- |
| 21.79 | 0.217 | 12.1 | -0.2 | -- | -0.591 | -- | -- | 0.156 | -- | 28.22 | 412 | -- | -- |
| 16.61 | 0.19 | 12.1 | -- | 0.578 | -0.369 | -- | -- | 0.107 | 5.05 | 29 | 4683 | -- | -- |
| 38.22 | 0.289 | 12.2 | -0.304 | -- | -- | -- | -- | 0.081 | -- | -- | -- | -- | -- |
| 22.23 | 0.221 | 12.1 | -- | 0.593 | -- | -- | -- | 0.102 | 5.2 | -- | -- | -- | -- |
| 22.81 | 0.222 | 12.1 | -- | -- | -0.561 | -- | -- | 0.177 | -- | 27.5 | 385 | -- | -- |
| 40.66 | 0.298 | 12.2 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.19 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 2 | 14.20 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 22 | 14.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 24 | 14.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 33 | 14.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 35 | 14.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 5 |
| 60 | 14.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 62 | 14.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 5 |
| 77 | 14.52 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 85 | 14.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 148 | 14.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 149 | 14.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 176 | 14.61 | temperature | 10 | 1440 | > th | dose dependent | sin | 2 | NA |
| 224 | 14.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 286 | 14.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 387 | 14.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 388 | 14.70 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 437 | 14.72 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 570 | 14.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 606 | 14.77 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 745 | 14.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 795 | 14.82 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 796 | 14.82 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 876 | 14.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 15 |
| 901 | 14.85 | temperature | 30 | 1440 | < th | dose dependent | sin | 3 | NA |
| 943 | 14.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 7 |