Os12g0123800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os12g0123800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 285.7 | 0.794 | 4.94 | 2.49 | 0.00578 | -1.89 | -1.13 | 5.05 | -0.243 | 15.7 | 25.81 | 4464 | -- | -- |
| 272.59 | 0.769 | 4.97 | 2.31 | 0.0852 | -2.12 | 1.32 | -- | -0.0506 | 3.57 | 22.6 | 20186 | -- | -- |
| 287.85 | 0.79 | 4.95 | 2.46 | 0.00596 | -1.94 | -- | 5.02 | -0.27 | 15.5 | 26.3 | 4495 | -- | -- |
| 273.97 | 0.771 | 4.98 | 2.54 | 0.17 | -2.33 | -- | -- | 0.029 | 21.6 | 22.7 | 21310 | -- | -- |
| 287.85 | 0.79 | 4.95 | 2.45 | -- | -1.94 | -- | 4.99 | -0.273 | -- | 26.31 | 4495 | -- | -- |
| 365.04 | 0.896 | 5.18 | 0.557 | 0.0709 | -- | -1.23 | -- | -0.873 | 16.1 | -- | -- | -- | -- |
| 368.38 | 0.899 | 5.18 | 0.542 | 0.145 | -- | -- | -- | -0.88 | 20.1 | -- | -- | -- | -- |
| 275.75 | 0.773 | 4.98 | 2.49 | -- | -2.3 | -- | -- | 0.0194 | -- | 22.65 | 21339 | -- | -- |
| 334.52 | 0.852 | 5.12 | -- | 0.172 | -0.875 | -- | -- | -0.435 | 21.5 | 28.2 | 13006 | -- | -- |
| 369.54 | 0.898 | 5.18 | 0.541 | -- | -- | -- | -- | -0.882 | -- | -- | -- | -- | -- |
| 376.13 | 0.907 | 5.2 | -- | 0.142 | -- | -- | -- | -0.941 | 20.4 | -- | -- | -- | -- |
| 330.63 | 0.847 | 5.12 | -- | -- | -1.05 | -- | -- | -0.602 | -- | 25.52 | 11396 | -- | -- |
| 377.26 | 0.907 | 5.19 | -- | -- | -- | -- | -- | -0.942 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 259.66 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 259.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 17 |
| 4 | 260.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 19 |
| 12 | 261.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 20 |
| 26 | 261.82 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 30 | 262.27 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 22 |
| 48 | 262.83 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 58 | 262.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 73 | 263.42 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 77 | 263.48 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 16 |
| 80 | 263.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 86 | 263.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 108 | 263.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 111 | 264.02 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 115 | 264.06 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 118 | 264.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 171 | 265.26 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 221 | 266.38 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 225 | 266.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 22 |
| 234 | 266.60 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 241 | 266.72 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 20 |
| 259 | 266.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 266 | 267.11 | humidity | 90.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 274 | 267.20 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 279 | 267.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 283 | 267.29 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 290 | 267.37 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 305 | 267.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 350 | 268.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 417 | 268.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 449 | 269.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 455 | 269.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 457 | 269.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 468 | 269.43 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 9 |
| 498 | 269.84 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 499 | 269.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 503 | 269.89 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 515 | 270.04 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 554 | 270.41 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 582 | 270.69 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 631 | 271.27 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 642 | 271.37 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 644 | 271.40 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 695 | 271.93 | humidity | 90.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 702 | 271.97 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 703 | 271.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 881 | 273.46 | temperature | 20.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 893 | 273.54 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 917 | 273.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 920 | 273.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 3 |
| 952 | 273.89 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 953 | 273.89 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 981 | 274.06 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 12 |