Os12g0123600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase).
FiT-DB / Search/ Help/ Sample detail
|
Os12g0123600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.84 | 0.51 | -701 | 4310 | 0.152 | -133000 | -0.593 | 815000 | -0.0524 | 10.2 | 995 | 271 | -- | -- |
| 127.71 | 0.53 | 3.05 | -0.0394 | 0.121 | -0.0643 | -0.651 | -- | -0.0661 | 10.6 | 995 | 271 | -- | -- |
| 121.2 | 0.513 | -704 | 4320 | 0.159 | -133000 | -- | 815000 | -0.06 | 9.15 | 995 | 270 | -- | -- |
| 128.76 | 0.532 | 3.04 | -0.0949 | 0.131 | 0.246 | -- | -- | -0.0353 | 10.1 | 52140 | 47520 | -- | -- |
| 122.72 | 0.516 | -704 | 4320 | -- | -133000 | -- | 815000 | -0.0574 | -- | 995 | 270 | -- | -- |
| 127.72 | 0.53 | 3.05 | -0.0399 | 0.121 | -- | -0.651 | -- | -0.0659 | 10.6 | -- | -- | -- | -- |
| 129.43 | 0.533 | 3.05 | -0.067 | 0.128 | -- | -- | -- | -0.0683 | 9.87 | -- | -- | -- | -- |
| 129.8 | 0.533 | 3.05 | -0.0953 | -- | 0.235 | -- | -- | -0.0369 | -- | 52140 | 47520 | -- | -- |
| 128.99 | 0.532 | 3.04 | -- | 0.131 | 0.221 | -- | -- | -0.0283 | 10.1 | 52140 | 47520 | -- | -- |
| 130.42 | 0.534 | 3.05 | -0.0684 | -- | -- | -- | -- | -0.0683 | -- | -- | -- | -- | -- |
| 129.55 | 0.532 | 3.05 | -- | 0.128 | -- | -- | -- | -0.0609 | 9.91 | -- | -- | -- | -- |
| 130.03 | 0.533 | 3.05 | -- | -- | 0.21 | -- | -- | -0.03 | -- | 52140 | 47520 | -- | -- |
| 130.54 | 0.533 | 3.05 | -- | -- | -- | -- | -- | -0.0607 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.48 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 2 |
| 2 | 107.48 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 2 |
| 30 | 110.66 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 1 |
| 61 | 115.65 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 63 | 116.13 | atmosphere | 995 | 270 | > th | dose independent | sin | 9 | NA |
| 93 | 117.50 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 16 |
| 107 | 118.12 | radiation | 10 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 122 | 118.22 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 143 | 118.47 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 1 |
| 216 | 119.08 | atmosphere | 995 | 270 | < th | dose independent | sin | 9 | NA |
| 231 | 119.32 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 2 |
| 315 | 119.73 | atmosphere | 995 | 270 | < th | dose dependent | sin | 9 | NA |
| 317 | 119.85 | wind | 1 | 10 | < th | dose independent | rect. | 23 | 1 |
| 321 | 119.85 | wind | 1 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 326 | 119.88 | wind | 1 | 10 | < th | dose dependent | rect. | 11 | 14 |
| 333 | 119.92 | wind | 1 | 10 | < th | dose dependent | rect. | 15 | 9 |
| 335 | 119.93 | wind | 1 | 10 | < th | dose dependent | rect. | 21 | 3 |
| 443 | 120.17 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 17 |
| 444 | 120.18 | wind | 1 | 10 | < th | dose independent | rect. | 11 | 14 |
| 477 | 120.34 | humidity | 70 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 502 | 120.39 | wind | 1 | 10 | < th | dose independent | rect. | 15 | 10 |
| 525 | 120.49 | humidity | 60 | 10 | < th | dose independent | rect. | 16 | 18 |
| 532 | 120.53 | humidity | 60 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 544 | 120.59 | atmosphere | 995 | 270 | > th | dose independent | rect. | 20 | 23 |
| 548 | 120.60 | wind | 1 | 10 | < th | dose dependent | sin | 15 | NA |
| 564 | 120.67 | humidity | 70 | 720 | > th | dose independent | rect. | 2 | 7 |
| 575 | 120.72 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 582 | 120.74 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 596 | 120.76 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 605 | 120.76 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 613 | 120.79 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 624 | 120.83 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 656 | 120.90 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 688 | 120.94 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 695 | 120.96 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 776 | 121.01 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 793 | 121.01 | humidity | 60 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 904 | 121.06 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 911 | 121.07 | wind | 1 | 90 | < th | dose independent | rect. | 22 | 2 |