Os12g0122100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF607 family protein.
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Os12g0122100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF607 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.88 | 0.44 | 10.8 | -0.21 | 0.921 | 0.673 | 0.625 | 0.087 | 0.34 | 23.3 | 20 | 10 | -- | -- |
| 87.89 | 0.437 | 10.8 | -0.21 | 0.919 | 0.676 | 0.711 | -- | 0.34 | 23.3 | 20 | 9 | -- | -- |
| 88.21 | 0.437 | 10.8 | -0.215 | 0.924 | 0.674 | -- | 0.59 | 0.339 | 23.2 | 20.77 | 9 | -- | -- |
| 90.04 | 0.442 | 10.8 | -0.237 | 0.901 | 0.696 | -- | -- | 0.337 | 23.3 | 20.58 | 9 | -- | -- |
| 97.81 | 0.461 | 10.8 | -0.233 | -- | 1.32 | -- | 0.488 | 0.359 | -- | 12.77 | 8 | -- | -- |
| 95.94 | 0.459 | 10.9 | -0.225 | 1.61 | -- | 0.791 | -- | 0.332 | 23.6 | -- | -- | -- | -- |
| 98.65 | 0.465 | 10.9 | -0.257 | 1.6 | -- | -- | -- | 0.329 | 23.6 | -- | -- | -- | -- |
| 99.14 | 0.464 | 10.8 | -0.249 | -- | 1.33 | -- | -- | 0.353 | -- | 12.82 | 8 | -- | -- |
| 91.51 | 0.446 | 10.8 | -- | 0.897 | 0.703 | -- | -- | 0.364 | 23.2 | 21.05 | 9 | -- | -- |
| 260.2 | 0.754 | 10.8 | -0.213 | -- | -- | -- | -- | 0.347 | -- | -- | -- | -- | -- |
| 100.39 | 0.469 | 10.9 | -- | 1.6 | -- | -- | -- | 0.357 | 23.6 | -- | -- | -- | -- |
| 100.77 | 0.468 | 10.8 | -- | -- | 1.33 | -- | -- | 0.38 | -- | 13.08 | 8 | -- | -- |
| 261.39 | 0.755 | 10.8 | -- | -- | -- | -- | -- | 0.37 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 3 | 76.48 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 6 | 76.92 | wind | 9.0 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 9 | 77.14 | temperature | 20.0 | 90 | > th | dose independent | rect. | 13 | 17 |
| 10 | 77.16 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 13 | 77.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 14 | 77.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 19 | 77.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 23 | 77.49 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 35 | 77.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 6 |
| 36 | 77.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 6 |
| 41 | 77.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 46 | 78.01 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 50 | 78.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 16 |
| 51 | 78.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 58 | 78.15 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 59 | 78.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 61 | 78.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 62 | 78.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 65 | 78.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 71 | 78.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 73 | 78.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 81 | 78.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 84 | 78.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 85 | 78.32 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 92 | 78.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 93 | 78.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 98 | 78.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 102 | 78.45 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 6 |
| 104 | 78.45 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 18 |
| 121 | 78.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 122 | 78.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 126 | 78.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 132 | 78.49 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 18 | 6 |
| 136 | 78.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 157 | 78.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 162 | 78.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 182 | 78.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 190 | 78.94 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 208 | 78.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 209 | 78.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 221 | 79.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 18 |
| 222 | 79.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 233 | 79.16 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 247 | 79.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 266 | 79.40 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 271 | 79.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 274 | 79.45 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 2 | 8 |
| 279 | 79.49 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 280 | 79.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 281 | 79.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 284 | 79.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 18 |
| 285 | 79.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 287 | 79.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 296 | 79.56 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 304 | 79.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 319 | 79.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 326 | 79.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 18 |
| 365 | 79.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 368 | 79.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 377 | 79.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 378 | 79.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 379 | 79.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 381 | 79.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 387 | 79.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 389 | 79.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 390 | 79.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 393 | 79.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 394 | 79.87 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 396 | 79.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 402 | 79.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 403 | 79.87 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 410 | 79.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 411 | 79.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 412 | 79.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 423 | 79.94 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 16 |
| 460 | 80.05 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 9 |
| 482 | 80.08 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 495 | 80.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 22 | 3 |
| 534 | 80.27 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 537 | 80.28 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 542 | 80.30 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 572 | 80.39 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 576 | 80.39 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 629 | 80.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 8 |
| 632 | 80.50 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 4 |
| 633 | 80.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 638 | 80.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 673 | 80.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 678 | 80.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 684 | 80.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 693 | 80.63 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 697 | 80.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 701 | 80.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 708 | 80.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 757 | 80.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 804 | 80.79 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 861 | 80.85 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 15 |
| 862 | 80.85 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 17 |
| 866 | 80.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 905 | 80.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 16 |
| 909 | 80.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 16 |