Os12g0120900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0120900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.25 | 0.544 | 5.22 | 1.11 | 0.186 | 1.3 | -0.437 | -1.03 | 0.183 | 12.1 | 20.4 | 26 | -- | -- |
| 134.84 | 0.541 | 5.2 | 1.3 | 0.176 | 1.25 | -0.713 | -- | 0.238 | 12.5 | 20.2 | 21 | -- | -- |
| 134.7 | 0.541 | 5.23 | 1.01 | 0.182 | 1.34 | -- | -1.56 | 0.151 | 11.1 | 20.59 | 22 | -- | -- |
| 136.95 | 0.545 | 5.2 | 1.28 | 0.195 | 1.24 | -- | -- | 0.228 | 11.3 | 20.3 | 22 | -- | -- |
| 136.37 | 0.544 | 5.24 | 0.966 | -- | 1.46 | -- | -1.62 | 0.126 | -- | 20.54 | 18 | -- | -- |
| 158.57 | 0.59 | 5.15 | 1.55 | 0.607 | -- | -0.562 | -- | 0.447 | 13.7 | -- | -- | -- | -- |
| 159.82 | 0.592 | 5.15 | 1.53 | 0.607 | -- | -- | -- | 0.443 | 13.6 | -- | -- | -- | -- |
| 138.78 | 0.549 | 5.21 | 1.19 | -- | 1.74 | -- | -- | 0.195 | -- | 14.28 | 12 | -- | -- |
| 173.19 | 0.613 | 5.25 | -- | 0.116 | 2.04 | -- | -- | 0.033 | 10.9 | 14.4 | 21 | -- | -- |
| 182.3 | 0.631 | 5.16 | 1.51 | -- | -- | -- | -- | 0.43 | -- | -- | -- | -- | -- |
| 221.71 | 0.697 | 5.19 | -- | 0.58 | -- | -- | -- | 0.273 | 13.6 | -- | -- | -- | -- |
| 173.65 | 0.614 | 5.25 | -- | -- | 2.13 | -- | -- | 0.0191 | -- | 10.27 | 20 | -- | -- |
| 242.27 | 0.727 | 5.2 | -- | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 2 | 130.89 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 6 | 131.56 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 13 | 132.05 | temperature | 25 | 10 | > th | dose independent | rect. | 23 | 21 |
| 15 | 132.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 18 | 132.35 | temperature | 10 | 30 | > th | dose dependent | sin | 4 | NA |
| 26 | 132.66 | temperature | 25 | 10 | > th | dose independent | rect. | 23 | 23 |
| 28 | 132.67 | temperature | 25 | 30 | < th | dose independent | sin | 5 | NA |
| 30 | 132.68 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 34 | 132.78 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |
| 35 | 132.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 36 | 132.81 | temperature | 25 | 10 | > th | dose independent | sin | 4 | NA |
| 67 | 133.38 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 72 | 133.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 74 | 133.46 | temperature | 30 | 30 | < th | dose dependent | sin | 4 | NA |
| 77 | 133.50 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 20 |
| 85 | 133.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 89 | 133.74 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 94 | 133.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 101 | 133.91 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 16 |
| 107 | 133.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 119 | 134.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 123 | 134.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 142 | 134.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 145 | 134.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 146 | 134.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 151 | 134.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 160 | 134.41 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 165 | 134.45 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 170 | 134.48 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 175 | 134.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 179 | 134.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 224 | 134.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 237 | 135.04 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 248 | 135.10 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 16 |
| 252 | 135.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 271 | 135.24 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 296 | 135.39 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 349 | 135.66 | temperature | 25 | 10 | < th | dose independent | rect. | 24 | 20 |
| 350 | 135.67 | temperature | 25 | 30 | < th | dose independent | rect. | 2 | 12 |
| 373 | 135.77 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 18 |
| 409 | 135.92 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 423 | 135.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 424 | 135.96 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 435 | 135.99 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 441 | 136.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 445 | 136.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 450 | 136.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 16 | 23 |
| 494 | 136.20 | temperature | 25 | 30 | < th | dose independent | rect. | 2 | 10 |
| 515 | 136.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 518 | 136.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 533 | 136.34 | wind | 3 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 539 | 136.37 | temperature | 25 | 30 | < th | dose independent | rect. | 16 | 22 |
| 586 | 136.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 587 | 136.47 | temperature | 25 | 10 | > th | dose independent | rect. | 21 | 23 |
| 668 | 136.69 | temperature | 25 | 10 | > th | dose independent | rect. | 24 | 12 |
| 674 | 136.70 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 23 |
| 682 | 136.73 | temperature | 25 | 10 | < th | dose independent | rect. | 24 | 14 |
| 703 | 136.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 743 | 136.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 772 | 137.00 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 784 | 137.03 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 786 | 137.04 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 825 | 137.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 865 | 137.22 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 881 | 137.26 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 916 | 137.31 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 16 |
| 981 | 137.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 987 | 137.46 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 22 |