Os12g0119000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os12g0119000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.66 | 0.59 | 9.19 | 2.02 | 1.67 | 1.38 | -0.71 | 0.606 | 0.312 | 0.938 | 19.8 | 661 | -- | -- |
| 157.75 | 0.585 | 9.2 | 1.95 | 1.74 | 1.39 | -0.545 | -- | 0.297 | 0.941 | 19.95 | 580 | -- | -- |
| 158.97 | 0.587 | 9.22 | 1.93 | 1.79 | 1.45 | -- | 0.166 | 0.265 | 1.08 | 20.09 | 538 | -- | -- |
| 158.88 | 0.587 | 9.21 | 1.92 | 1.81 | 1.46 | -- | -- | 0.274 | 1.12 | 20.24 | 527 | -- | -- |
| 298.15 | 0.804 | 9.2 | 1.75 | -- | 2.22 | -- | 0.499 | 0.177 | -- | 17.79 | 918 | -- | -- |
| 196.52 | 0.657 | 9.16 | 2.26 | 1.83 | -- | -0.56 | -- | 0.533 | 0.0195 | -- | -- | -- | -- |
| 197.87 | 0.659 | 9.16 | 2.29 | 1.83 | -- | -- | -- | 0.535 | 0.00258 | -- | -- | -- | -- |
| 295.19 | 0.8 | 9.21 | 1.75 | -- | 1.99 | -- | -- | 0.181 | -- | 21.6 | 935 | -- | -- |
| 244.34 | 0.728 | 9.28 | -- | 1.46 | 2.05 | -- | -- | -0.045 | 0.489 | 17.6 | 958 | -- | -- |
| 408.75 | 0.945 | 9.12 | 2.34 | -- | -- | -- | -- | 0.561 | -- | -- | -- | -- | -- |
| 335.59 | 0.857 | 9.22 | -- | 1.86 | -- | -- | -- | 0.281 | 0.0724 | -- | -- | -- | -- |
| 362.95 | 0.887 | 9.28 | -- | -- | 2.86 | -- | -- | -0.128 | -- | 17.21 | 935 | -- | -- |
| 553.52 | 1.1 | 9.18 | -- | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.56 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 19 |
| 2 | 151.68 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 15 |
| 7 | 151.98 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 73 | 157.56 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 79 | 157.62 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 82 | 157.64 | temperature | 25 | 270 | > th | dose independent | sin | 20 | NA |
| 85 | 157.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 89 | 157.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 90 | 157.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 91 | 157.82 | temperature | 25 | 270 | < th | dose independent | sin | 20 | NA |
| 92 | 157.84 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 95 | 157.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 99 | 157.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 103 | 157.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 107 | 157.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 113 | 158.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 123 | 158.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 126 | 158.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 142 | 158.26 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 18 |
| 159 | 158.35 | temperature | 20 | 1440 | > th | dose dependent | sin | 9 | NA |
| 164 | 158.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 175 | 158.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 195 | 158.48 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 198 | 158.51 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 208 | 158.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 15 |
| 222 | 158.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 244 | 158.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 253 | 158.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 269 | 158.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 295 | 158.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 312 | 158.85 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 381 | 159.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 432 | 159.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 433 | 159.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 461 | 159.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 572 | 159.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 11 |
| 584 | 159.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 612 | 159.34 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 694 | 159.41 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 720 | 159.43 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 8 |
| 722 | 159.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 917 | 159.63 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 15 |