Os12g0118900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os12g0118900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.05 | 0.523 | 5.95 | 0.29 | 2.96 | -0.727 | -0.11 | 0.273 | -0.121 | 5.97 | 20.1 | 9 | -- | -- |
| 124.37 | 0.523 | 5.96 | 0.242 | 2.96 | -0.745 | -0.191 | -- | -0.132 | 5.98 | 20.15 | 8 | -- | -- |
| 124.04 | 0.523 | 5.95 | 0.287 | 2.96 | -0.724 | -- | 0.284 | -0.122 | 5.97 | 20.11 | 8 | -- | -- |
| 124.46 | 0.523 | 5.96 | 0.239 | 2.96 | -0.742 | -- | -- | -0.132 | 5.98 | 20.15 | 8 | -- | -- |
| 349.18 | 0.87 | 5.96 | 0.167 | -- | -1.97 | -- | -0.552 | 0.163 | -- | 25.8 | 373 | -- | -- |
| 146.78 | 0.568 | 5.99 | 0.0433 | 3.02 | -- | 0.0516 | -- | -0.269 | 5.77 | -- | -- | -- | -- |
| 146.78 | 0.567 | 5.99 | 0.0437 | 3.02 | -- | -- | -- | -0.269 | 5.77 | -- | -- | -- | -- |
| 337.99 | 0.856 | 5.88 | 0.674 | -- | -2.05 | -- | -- | 0.501 | -- | 25.8 | 364 | -- | -- |
| 125.9 | 0.525 | 5.97 | -- | 2.97 | -0.702 | -- | -- | -0.165 | 5.96 | 20.15 | 8 | -- | -- |
| 619.63 | 1.16 | 6.04 | 0.138 | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
| 146.83 | 0.567 | 5.99 | -- | 3.02 | -- | -- | -- | -0.274 | 5.77 | -- | -- | -- | -- |
| 349.7 | 0.871 | 5.9 | -- | -- | -1.99 | -- | -- | 0.409 | -- | 25.8 | 364 | -- | -- |
| 620.13 | 1.16 | 6.04 | -- | -- | -- | -- | -- | -0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 2 | 113.75 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 3 | 114.05 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 6 |
| 5 | 114.21 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 6 | 114.51 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 7 | 114.70 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 15 | 115.23 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 40 | 116.89 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 50 | 117.25 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 71 | 118.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 99 | 119.38 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 2 |
| 106 | 119.58 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 107 | 119.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 111 | 119.66 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 12 |
| 113 | 119.72 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 13 |
| 114 | 119.72 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 118 | 119.78 | temperature | 20.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 122 | 119.81 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 138 | 120.31 | temperature | 20.0 | 10 | > th | dose independent | rect. | 17 | 11 |
| 149 | 120.44 | temperature | 25.0 | 270 | > th | dose independent | sin | 11 | NA |
| 150 | 120.45 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 162 | 120.63 | temperature | 15.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 204 | 121.05 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 206 | 121.08 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 209 | 121.14 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 210 | 121.14 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 215 | 121.22 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 232 | 121.40 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 239 | 121.48 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 244 | 121.51 | temperature | 20.0 | 10 | > th | dose independent | sin | 9 | NA |
| 252 | 121.54 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 291 | 121.91 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 326 | 122.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 327 | 122.08 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 328 | 122.08 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 330 | 122.08 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 331 | 122.08 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 334 | 122.08 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 335 | 122.08 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 337 | 122.08 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 342 | 122.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 343 | 122.08 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 344 | 122.08 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 349 | 122.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 361 | 122.15 | temperature | 30.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 362 | 122.15 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 366 | 122.19 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 387 | 122.28 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 388 | 122.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 391 | 122.28 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 395 | 122.28 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 405 | 122.28 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 406 | 122.28 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 426 | 122.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 475 | 122.43 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 16 |
| 476 | 122.43 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 500 | 122.61 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 13 |
| 519 | 122.72 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 525 | 122.77 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 533 | 122.82 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 3 |
| 538 | 122.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 542 | 122.88 | temperature | 25.0 | 270 | < th | dose independent | sin | 11 | NA |
| 562 | 123.04 | temperature | 20.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 573 | 123.13 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 584 | 123.20 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 14 |
| 597 | 123.27 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 13 |
| 598 | 123.27 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 17 |
| 646 | 123.58 | temperature | 20.0 | 10 | < th | dose independent | sin | 8 | NA |
| 653 | 123.62 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 693 | 123.83 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 708 | 123.92 | temperature | 20.0 | 90 | < th | dose independent | sin | 9 | NA |
| 745 | 124.10 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 764 | 124.23 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 767 | 124.24 | temperature | 20.0 | 10 | > th | dose independent | no | NA | NA |
| 777 | 124.27 | temperature | 20.0 | 10 | < th | dose independent | rect. | 10 | 22 |
| 881 | 124.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 12 |
| 885 | 124.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 897 | 124.64 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 3 |
| 902 | 124.66 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 903 | 124.66 | temperature | 20.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 910 | 124.69 | temperature | 20.0 | 10 | < th | dose independent | no | NA | NA |
| 918 | 124.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 928 | 124.73 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 953 | 124.83 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 968 | 124.86 | temperature | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |