Os12g0118800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os12g0118800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.31 | 0.668 | 5.76 | -0.757 | 2.86 | 4.84 | 0.159 | -2.1 | -0.925 | 16.6 | 9.526 | 735 | 18.8 | 14.1 |
| 201.5 | 0.661 | 5.74 | -0.373 | 3.98 | 6.3 | 0.915 | -- | -0.826 | 17.1 | 3.551 | 787 | 17.9 | 14.5 |
| 202.07 | 0.662 | 5.77 | -0.761 | 2.84 | 4.85 | -- | -2.02 | -0.932 | 16.6 | 9.266 | 741 | 18.8 | 14.2 |
| 201.76 | 0.662 | 5.77 | -0.495 | 3.83 | 5.98 | -- | -- | -0.879 | 17 | 3.096 | 795 | 17.8 | 14.5 |
| 257.34 | 0.747 | 5.74 | -0.773 | -- | 4.76 | -- | -1.45 | -0.859 | -- | 10.78 | 869 | 21.2 | 13 |
| 336.64 | 0.86 | 5.51 | 0.188 | 2.29 | -- | -0.207 | -- | -0.256 | 11.6 | -- | -- | -- | -- |
| 336.83 | 0.859 | 5.51 | 0.18 | 2.29 | -- | -- | -- | -0.256 | 11.6 | -- | -- | -- | -- |
| 229.91 | 0.706 | 5.74 | -0.565 | -- | 4.48 | -- | -- | -0.871 | -- | 12.85 | 689 | 21.2 | 15.5 |
| 207.96 | 0.672 | 5.77 | -- | 3.81 | 5.89 | -- | -- | -0.812 | 16.9 | 2.755 | 796 | 17.7 | 14.4 |
| 665.24 | 1.21 | 5.57 | 0.117 | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
| 337.68 | 0.86 | 5.52 | -- | 2.28 | -- | -- | -- | -0.277 | 11.6 | -- | -- | -- | -- |
| 218.83 | 0.689 | 5.66 | -- | -- | 4 | -- | -- | -0.681 | -- | 7.299 | 635 | 21.3 | 16.4 |
| 665.6 | 1.2 | 5.57 | -- | -- | -- | -- | -- | -0.295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 8 | 210.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 11 | 211.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 17 | 213.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 31 | 214.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 32 | 214.05 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 70 | 217.73 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 113 | 219.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 222 | 222.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 224 | 222.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 229 | 222.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 231 | 222.89 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 239 | 223.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 240 | 223.05 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 15 |
| 274 | 223.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 287 | 224.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 288 | 224.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 325 | 224.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 352 | 225.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 886 | 229.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 930 | 229.50 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |