Os12g0114000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0114000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.84 | 0.709 | 3.38 | -1.75 | 0.389 | 5.25 | -2.13 | -9.55 | -0.373 | 23.1 | 0.5 | 307 | -- | -- |
| 230.95 | 0.708 | 3.33 | -1.51 | 0.411 | 2.9 | -1.46 | -- | -0.377 | 23.1 | 0.9368 | 301 | -- | -- |
| 246.24 | 0.731 | 3.36 | -1.59 | 0.411 | 4.43 | -- | -7.16 | -0.411 | 23 | 0.7389 | 301 | -- | -- |
| 245.55 | 0.73 | 3.34 | -1.5 | 0.387 | 2.51 | -- | -- | -0.395 | 22.8 | 0.9742 | 301 | -- | -- |
| 255.05 | 0.744 | 3.34 | -1.6 | -- | 4.19 | -- | -5.49 | -0.396 | -- | 0.7742 | 301 | -- | -- |
| 253.92 | 0.747 | 3.34 | -1.43 | 0.433 | -- | -1.69 | -- | -0.433 | 23.2 | -- | -- | -- | -- |
| 265.69 | 0.763 | 3.34 | -1.36 | 0.455 | -- | -- | -- | -0.425 | 22.4 | -- | -- | -- | -- |
| 254.64 | 0.743 | 3.32 | -1.5 | -- | 2.69 | -- | -- | -0.395 | -- | 0.985 | 301 | -- | -- |
| 303.14 | 0.811 | 3.31 | -- | 0.398 | 1.86 | -- | -- | -0.245 | 22.4 | 0.7552 | 301 | -- | -- |
| 278.31 | 0.78 | 3.33 | -1.35 | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
| 314.45 | 0.83 | 3.31 | -- | 0.448 | -- | -- | -- | -0.273 | 22.1 | -- | -- | -- | -- |
| 312.47 | 0.823 | 3.29 | -- | -- | 2.05 | -- | -- | -0.24 | -- | 0.8319 | 301 | -- | -- |
| 326.59 | 0.844 | 3.3 | -- | -- | -- | -- | -- | -0.273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.59 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 10 | 220.69 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 9 | 14 |
| 18 | 223.03 | humidity | 90.0 | 90 | > th | dose dependent | sin | 20 | NA |
| 55 | 225.75 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 10 |
| 66 | 227.03 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 67 | 227.05 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 75 | 227.21 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 15 |
| 84 | 227.49 | precipitation | 0.1 | 270 | < th | dose independent | sin | 12 | NA |
| 86 | 227.49 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 12 | NA |
| 93 | 227.76 | precipitation | 0.1 | 270 | > th | dose independent | sin | 13 | NA |
| 110 | 228.85 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 3 |
| 114 | 228.99 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 115 | 229.04 | humidity | 90.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 121 | 229.21 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 127 | 229.52 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 2 |
| 128 | 229.55 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 17 |
| 129 | 229.58 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 15 |
| 139 | 229.82 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 11 | NA |
| 153 | 229.94 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 20 |
| 166 | 230.03 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 8 |
| 167 | 230.03 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 181 | 230.35 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 1 |
| 182 | 230.35 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 192 | 230.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 200 | 230.66 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 23 |
| 202 | 230.67 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 210 | 230.71 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 223 | 230.83 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 20 |
| 228 | 230.88 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 16 |
| 230 | 230.88 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 231 | 230.89 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 249 | 230.98 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 284 | 231.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 21 |
| 296 | 231.22 | precipitation | 0.1 | 720 | < th | dose independent | sin | 17 | NA |
| 297 | 231.22 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 17 | NA |
| 327 | 231.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 20 |
| 332 | 231.40 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 22 |
| 347 | 231.44 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 357 | 231.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 358 | 231.46 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 359 | 231.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 362 | 231.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 364 | 231.47 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 18 |
| 372 | 231.47 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 378 | 231.50 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 385 | 231.52 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 404 | 231.57 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 407 | 231.58 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 429 | 231.63 | humidity | 90.0 | 90 | > th | dose independent | rect. | 7 | 16 |
| 447 | 231.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 453 | 231.70 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 13 |
| 487 | 231.93 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 23 |
| 496 | 231.97 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 23 |
| 498 | 231.99 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 12 | 13 |
| 506 | 232.02 | radiation | 1.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 511 | 232.04 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 531 | 232.14 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 533 | 232.15 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 535 | 232.16 | precipitation | 0.1 | 270 | > th | dose independent | no | NA | NA |
| 536 | 232.16 | precipitation | 0.1 | 270 | < th | dose independent | no | NA | NA |
| 541 | 232.16 | precipitation | 0.1 | 270 | < th | dose dependent | no | NA | NA |
| 550 | 232.18 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 7 |
| 579 | 232.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 602 | 232.34 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 12 | 9 |
| 625 | 232.44 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 637 | 232.46 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 638 | 232.47 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 646 | 232.50 | precipitation | 0.1 | 720 | > th | dose independent | sin | 17 | NA |
| 663 | 232.56 | radiation | 1.0 | 1440 | > th | dose independent | no | NA | NA |
| 664 | 232.56 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 720 | 232.57 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 17 |
| 723 | 232.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 756 | 232.67 | precipitation | 0.1 | 720 | > th | dose independent | sin | 22 | NA |
| 770 | 232.73 | radiation | 1.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 790 | 232.82 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 13 |
| 818 | 232.97 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 825 | 232.99 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 13 |
| 826 | 233.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 831 | 233.01 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 835 | 233.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 836 | 233.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 21 |
| 837 | 233.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 852 | 233.05 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 858 | 233.05 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 859 | 233.06 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 873 | 233.07 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 878 | 233.08 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 882 | 233.08 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 883 | 233.09 | radiation | 1.0 | 1440 | < th | dose independent | no | NA | NA |
| 909 | 233.12 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 951 | 233.14 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 960 | 233.16 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 8 |