Os12g0113600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0113600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.17 | 0.573 | 4.75 | 3.41 | 0.401 | -189 | 0.818 | -388 | -0.0367 | 18.4 | 15 | 90 | -- | -- |
| 153.1 | 0.581 | 3.15 | 0.00905 | 0.399 | -4.65 | 0.838 | -- | -0.0492 | 18.4 | 15 | 90 | -- | -- |
| 152.81 | 0.576 | 4.76 | 3.41 | 0.404 | -189 | -- | -388 | -0.0344 | 18.6 | 15.02 | 92 | -- | -- |
| 152.75 | 0.576 | 3.14 | 0.0508 | 0.409 | -4.66 | -- | -- | -0.0318 | 18.6 | 14.77 | 352 | -- | -- |
| 161.33 | 0.592 | 4.76 | 3.43 | -- | -188 | -- | -388 | -0.0426 | -- | 15.02 | 95 | -- | -- |
| 195.19 | 0.655 | 3.16 | -0.168 | 0.413 | -- | 0.688 | -- | -0.0941 | 18.6 | -- | -- | -- | -- |
| 196.1 | 0.656 | 3.16 | -0.18 | 0.419 | -- | -- | -- | -0.0932 | 19.2 | -- | -- | -- | -- |
| 161.28 | 0.591 | 3.14 | 0.0372 | -- | -4.68 | -- | -- | -0.0423 | -- | 14.77 | 363 | -- | -- |
| 152.33 | 0.575 | 3.15 | -- | 0.428 | -4.62 | -- | -- | -0.0593 | 18.6 | 14.7 | 548 | -- | -- |
| 205.38 | 0.67 | 3.15 | -0.188 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 196.95 | 0.656 | 3.16 | -- | 0.421 | -- | -- | -- | -0.0731 | 19.1 | -- | -- | -- | -- |
| 160.93 | 0.591 | 3.14 | -- | -- | -4.67 | -- | -- | -0.0449 | -- | 14.73 | 544 | -- | -- |
| 206.31 | 0.67 | 3.15 | -- | -- | -- | -- | -- | -0.0797 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.82 | temperature | 15 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 2 | 149.82 | temperature | 15 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 3 | 150.12 | temperature | 15 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 4 | 150.22 | temperature | 15 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 6 | 150.52 | temperature | 15 | 30 | > th | dose independent | rect. | 1 | 23 |
| 7 | 150.55 | temperature | 15 | 720 | > th | dose independent | sin | 19 | NA |
| 11 | 150.70 | temperature | 15 | 720 | < th | dose independent | rect. | 5 | 19 |
| 13 | 150.72 | temperature | 15 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 15 | 150.76 | temperature | 15 | 720 | < th | dose independent | rect. | 9 | 15 |
| 21 | 150.82 | temperature | 15 | 720 | < th | dose independent | sin | 20 | NA |
| 24 | 150.84 | temperature | 15 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 30 | 150.86 | temperature | 15 | 720 | < th | dose dependent | sin | 16 | NA |
| 33 | 150.88 | temperature | 15 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 36 | 150.89 | temperature | 15 | 720 | < th | dose dependent | rect. | 18 | 8 |
| 43 | 150.91 | temperature | 15 | 1440 | > th | dose independent | rect. | 8 | 14 |
| 44 | 150.91 | temperature | 15 | 720 | < th | dose dependent | sin | 20 | NA |
| 48 | 150.92 | temperature | 15 | 720 | < th | dose dependent | sin | 23 | NA |
| 54 | 150.94 | temperature | 15 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 57 | 150.95 | temperature | 15 | 720 | < th | dose independent | rect. | 12 | 14 |
| 65 | 151.01 | temperature | 15 | 90 | > th | dose independent | sin | 12 | NA |
| 66 | 151.01 | temperature | 15 | 270 | > th | dose independent | sin | 15 | NA |
| 67 | 151.01 | temperature | 15 | 270 | > th | dose independent | sin | 1 | NA |
| 68 | 151.01 | temperature | 20 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 71 | 151.02 | temperature | 15 | 90 | > th | dose independent | sin | 9 | NA |
| 80 | 151.04 | temperature | 15 | 90 | > th | dose independent | sin | 22 | NA |
| 91 | 151.12 | temperature | 15 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 109 | 151.17 | temperature | 15 | 90 | > th | dose independent | no | NA | NA |
| 111 | 151.17 | temperature | 15 | 90 | < th | dose independent | sin | 7 | NA |
| 159 | 151.17 | temperature | 15 | 90 | < th | dose independent | no | NA | NA |
| 161 | 151.17 | temperature | 15 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 163 | 151.17 | temperature | 15 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 166 | 151.17 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 297 | 151.17 | temperature | 15 | 270 | < th | dose independent | rect. | 24 | 10 |
| 747 | 151.17 | temperature | 15 | 90 | < th | dose dependent | sin | 7 | NA |
| 796 | 151.17 | temperature | 15 | 90 | < th | dose dependent | no | NA | NA |
| 798 | 151.17 | temperature | 15 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 800 | 151.17 | temperature | 15 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 803 | 151.17 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 934 | 151.17 | temperature | 15 | 270 | < th | dose dependent | rect. | 24 | 10 |