Os12g0110200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0110200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 340.33 | 0.867 | 2.93 | 0.689 | 0.0927 | -0.908 | -1.02 | 13.9 | -0.201 | 3.53 | 30.7 | 209 | -- | -- |
| 351.34 | 0.88 | 3.05 | -0.243 | 0.0244 | 0.296 | 1.38 | -- | -0.224 | 16.4 | 30.7 | 209 | -- | -- |
| 343.1 | 0.863 | 2.93 | 0.705 | 0.119 | -0.877 | -- | 14.1 | -0.19 | 2.17 | 30.8 | 208 | -- | -- |
| 348.71 | 0.87 | 3.04 | -0.262 | 0.0891 | 0.682 | -- | -- | -0.179 | 4.44 | 30.6 | 209 | -- | -- |
| 343.87 | 0.864 | 2.92 | 0.78 | -- | -1.03 | -- | 15 | -0.182 | -- | 30.9 | 208 | -- | -- |
| 353.42 | 0.881 | 3.05 | -0.214 | 0.0879 | -- | 1.5 | -- | -0.244 | 16.6 | -- | -- | -- | -- |
| 358.44 | 0.887 | 3.05 | -0.207 | 0.166 | -- | -- | -- | -0.236 | 19.9 | -- | -- | -- | -- |
| 348.86 | 0.87 | 3.03 | -0.282 | -- | 0.666 | -- | -- | -0.183 | -- | 30.82 | 208 | -- | -- |
| 350.32 | 0.872 | 3.04 | -- | 0.126 | 0.704 | -- | -- | -0.168 | 2.58 | 30.97 | 207 | -- | -- |
| 359.94 | 0.887 | 3.05 | -0.209 | -- | -- | -- | -- | -0.238 | -- | -- | -- | -- | -- |
| 359.57 | 0.887 | 3.05 | -- | 0.168 | -- | -- | -- | -0.213 | 19.8 | -- | -- | -- | -- |
| 350.84 | 0.872 | 3.03 | -- | -- | 0.643 | -- | -- | -0.157 | -- | 30.96 | 207 | -- | -- |
| 361.1 | 0.887 | 3.04 | -- | -- | -- | -- | -- | -0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 331.86 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 2 |
| 21 | 332.12 | humidity | 60.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 27 | 332.84 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 3 |
| 29 | 332.84 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 3 |
| 42 | 334.01 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 2 |
| 43 | 334.01 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 46 | 334.03 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 56 | 334.03 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 70 | 334.32 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 84 | 335.29 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 101 | 335.60 | temperature | 30.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 109 | 336.53 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 12 | 16 |
| 110 | 336.57 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 120 | 337.80 | temperature | 30.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 121 | 337.81 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 123 | 338.11 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 8 | NA |
| 124 | 338.11 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 142 | 338.28 | humidity | 70.0 | 10 | < th | dose independent | rect. | 18 | 1 |
| 144 | 338.35 | temperature | 25.0 | 10 | > th | dose independent | rect. | 12 | 13 |
| 162 | 338.44 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 1 |
| 195 | 338.51 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 16 | 2 |
| 196 | 338.51 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 12 | 13 |
| 197 | 338.52 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 211 | 338.53 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 1 |
| 218 | 338.53 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 258 | 338.57 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 273 | 338.60 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 296 | 338.67 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 12 | 11 |
| 313 | 338.70 | wind | 3.0 | 10 | > th | dose independent | rect. | 12 | 19 |
| 374 | 338.99 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 13 | 2 |
| 486 | 339.00 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 574 | 339.01 | atmosphere | 995.0 | 10 | < th | dose independent | sin | 8 | NA |
| 575 | 339.02 | atmosphere | 995.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 701 | 339.25 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 12 | 5 |
| 852 | 339.55 | wind | 3.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 862 | 339.70 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 12 | 4 |
| 879 | 339.73 | wind | 3.0 | 10 | > th | dose independent | rect. | 12 | 13 |
| 884 | 339.80 | radiation | 10.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 918 | 339.99 | radiation | 40.0 | 10 | > th | dose independent | sin | 13 | NA |
| 935 | 340.21 | wind | 1.0 | 10 | > th | dose dependent | rect. | 12 | 13 |
| 937 | 340.26 | wind | 1.0 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 940 | 340.27 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 941 | 340.28 | wind | 3.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 942 | 340.29 | temperature | 30.0 | 90 | > th | dose independent | rect. | 16 | 22 |
| 949 | 340.42 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 964 | 340.46 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 982 | 340.65 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 987 | 340.70 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 3 |
| 998 | 340.77 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 2 |