Os12g0105600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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Os12g0105600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.72 | 0.469 | 9.99 | 2.68 | 0.54 | -1.71 | 1.29 | 0.268 | 0.492 | 23.4 | 17.5 | 852 | -- | -- |
| 99.77 | 0.465 | 10 | 2.62 | 0.542 | -1.71 | 1.35 | -- | 0.479 | 23.4 | 17.39 | 853 | -- | -- |
| 105.63 | 0.479 | 9.96 | 2.87 | 0.54 | -1.74 | -- | 1.38 | 0.539 | 0.0575 | 17.28 | 896 | -- | -- |
| 105.73 | 0.479 | 9.99 | 2.48 | 0.287 | -1.21 | -- | -- | 0.464 | 2.44 | 21.47 | 1601 | -- | -- |
| 109.16 | 0.487 | 9.96 | 2.8 | -- | -1.32 | -- | 0.7 | 0.56 | -- | 21.11 | 1682 | -- | -- |
| 152.25 | 0.578 | 10.1 | 2.11 | 0.224 | -- | 1.14 | -- | 0.172 | 0.706 | -- | -- | -- | -- |
| 156.77 | 0.586 | 10.1 | 2.06 | 0.266 | -- | -- | -- | 0.163 | 2.83 | -- | -- | -- | -- |
| 108.18 | 0.484 | 9.99 | 2.54 | -- | -1.2 | -- | -- | 0.456 | -- | 22.85 | 6052 | -- | -- |
| 255.69 | 0.745 | 10.1 | -- | 0.304 | -0.593 | -- | -- | 0.0408 | 1.99 | 22.79 | 1544 | -- | -- |
| 160.86 | 0.593 | 10.1 | 2.08 | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
| 269.07 | 0.767 | 10.1 | -- | 0.307 | -- | -- | -- | -0.0667 | 2.89 | -- | -- | -- | -- |
| 253.77 | 0.742 | 10.1 | -- | -- | -0.704 | -- | -- | -0.0803 | -- | 29.03 | 6063 | -- | -- |
| 274.5 | 0.773 | 10.1 | -- | -- | -- | -- | -- | -0.0603 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 3 | 94.03 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 7 | 94.81 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 8 | 94.83 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 10 | 95.07 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 11 | 95.08 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 16 | 95.37 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 32 | 95.78 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 37 | 95.93 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 47 | 96.41 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 49 | 96.56 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 53 | 96.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 56 | 96.94 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 21 |
| 64 | 97.14 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 69 | 97.27 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 77 | 97.41 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 21 |
| 90 | 97.61 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 104 | 97.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 22 |
| 137 | 98.10 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 162 | 98.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 169 | 98.44 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 22 |
| 207 | 98.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 218 | 98.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 19 |
| 219 | 98.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 220 | 98.76 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 223 | 98.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 228 | 98.79 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 235 | 98.85 | wind | 5 | 43200 | > th | dose independent | sin | 3 | NA |
| 262 | 99.03 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 263 | 99.03 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 264 | 99.03 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 265 | 99.03 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 280 | 99.09 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 287 | 99.11 | wind | 5 | 43200 | < th | dose independent | sin | 3 | NA |
| 288 | 99.11 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 301 | 99.16 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 307 | 99.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 311 | 99.19 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 318 | 99.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 319 | 99.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 340 | 99.27 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 357 | 99.31 | wind | 5 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 360 | 99.32 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 363 | 99.33 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 366 | 99.33 | wind | 5 | 43200 | > th | dose dependent | sin | 13 | NA |
| 373 | 99.34 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 385 | 99.36 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 393 | 99.38 | wind | 5 | 43200 | > th | dose independent | sin | 12 | NA |
| 415 | 99.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 426 | 99.42 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 473 | 99.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 481 | 99.57 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 485 | 99.58 | wind | 5 | 43200 | < th | dose independent | sin | 12 | NA |
| 522 | 99.67 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 581 | 99.75 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 584 | 99.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 616 | 99.81 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 631 | 99.85 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 648 | 99.90 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 688 | 99.99 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 732 | 100.08 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 17 |
| 764 | 100.15 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 774 | 100.17 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 788 | 100.20 | wind | 9 | 43200 | < th | dose independent | sin | 13 | NA |
| 837 | 100.30 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 858 | 100.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 868 | 100.38 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 895 | 100.45 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 924 | 100.51 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 985 | 100.62 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 986 | 100.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 990 | 100.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 994 | 100.64 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 995 | 100.64 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |