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Os12g0104800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Clathrin heavy chain.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0141) R2 : 0.699
β1 : 1.49 (0.0516) R2dD : 0.57 R2D : 0.336
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.609 (0.0301) R2dN8 : 0.363 R2N8 : 0.129
σ : 0.264
deviance : 31.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.68 0.224 13.6 1.48 0.233 0.552 0.125 -1.11 0.676 0.0297 92.61 333 -- --
24.03 0.228 13.6 1.46 0.239 0.574 0.228 -- 0.674 23.3 92.64 355 -- --
22.63 0.222 13.6 1.5 0.245 0.532 -- -1.12 0.672 0.325 92.83 372 -- --
24.16 0.229 13.6 1.45 0.238 0.542 -- -- 0.664 0.0841 92.8 354 -- --
26.04 0.238 13.6 1.47 -- 0.572 -- -1.03 0.681 -- 92.48 304 -- --
27.2 0.245 13.6 1.47 0.283 -- -0.0674 -- 0.601 2.24 -- -- -- --
27.22 0.244 13.6 1.48 0.282 -- -- -- 0.602 2.14 -- -- -- --
27.25 0.243 13.6 1.43 -- 0.494 -- -- 0.674 -- 92.1 277 -- --
78.19 0.412 13.6 -- 0.294 0.665 -- -- 0.542 23.6 91.47 399 -- --
31.97 0.264 13.6 1.49 -- -- -- -- 0.609 -- -- -- -- --
84.57 0.43 13.7 -- 0.31 -- -- -- 0.437 2.24 -- -- -- --
81.53 0.421 13.6 -- -- 0.625 -- -- 0.53 -- 91.65 268 -- --
90.3 0.444 13.7 -- -- -- -- -- 0.444 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.46 temperature 20 4320 < th dose independent rect. 18 2
3 23.53 temperature 20 4320 > th dose independent rect. 17 4
7 23.58 temperature 20 10 > th dose independent sin 12 NA
9 23.58 humidity 90 270 > th dose dependent rect. 23 11
16 23.60 humidity 90 270 > th dose dependent rect. 23 14
24 23.63 humidity 90 270 > th dose dependent sin 7 NA
30 23.64 temperature 20 270 > th dose independent sin 15 NA
37 23.65 temperature 20 90 > th dose independent sin 13 NA
59 23.68 temperature 20 4320 < th dose independent rect. 12 9
60 23.68 temperature 20 4320 > th dose independent rect. 11 11
61 23.68 temperature 20 270 > th dose independent rect. 19 11
92 23.74 temperature 20 720 > th dose independent rect. 18 6
100 23.76 temperature 20 10 > th dose independent rect. 20 12
101 23.76 temperature 20 4320 < th dose dependent rect. 20 2
107 23.77 temperature 20 10 > th dose independent rect. 20 10
123 23.80 atmosphere 1010 720 < th dose independent rect. 22 1
144 23.82 temperature 20 4320 < th dose dependent rect. 18 4
146 23.82 humidity 90 720 > th dose dependent rect. 20 10
233 23.94 temperature 20 720 > th dose independent rect. 11 15
240 23.94 humidity 90 720 > th dose dependent rect. 18 15
305 24.00 temperature 20 10 > th dose independent rect. 22 10
329 24.02 temperature 20 720 > th dose independent rect. 9 17
372 24.06 humidity 90 30 > th dose dependent sin 2 NA
398 24.07 humidity 90 270 > th dose dependent rect. 11 23
405 24.08 humidity 90 270 > th dose dependent no NA NA
485 24.15 atmosphere 1010 720 < th dose independent rect. 20 4
491 24.15 temperature 20 720 > th dose independent rect. 7 17
499 24.16 temperature 20 4320 > th dose independent sin 20 NA
503 24.16 temperature 20 720 > th dose independent rect. 5 19
532 24.19 humidity 90 270 > th dose dependent rect. 4 23
552 24.21 temperature 20 10 > th dose independent rect. 14 16
559 24.22 temperature 20 4320 < th dose independent sin 20 NA
570 24.23 temperature 20 270 < th dose independent sin 15 NA
619 24.26 humidity 90 10 < th dose independent rect. 2 12
632 24.27 humidity 90 720 > th dose dependent rect. 23 3
672 24.30 temperature 20 10 < th dose independent sin 13 NA
691 24.30 atmosphere 1010 270 < th dose dependent rect. 22 9
698 24.31 atmosphere 1010 720 < th dose independent rect. 18 6
708 24.31 temperature 20 720 < th dose dependent rect. 12 13
730 24.33 temperature 20 270 < th dose independent rect. 15 13
799 24.37 humidity 90 10 < th dose independent sin 3 NA
800 24.37 temperature 20 720 > th dose independent rect. 20 1
801 24.37 wind 1 1440 > th dose independent rect. 23 2
803 24.37 temperature 20 10 < th dose independent rect. 19 9
819 24.38 temperature 20 720 < th dose independent sin 19 NA
827 24.38 temperature 20 270 < th dose dependent sin 15 NA
828 24.38 humidity 90 720 > th dose dependent rect. 1 1
836 24.39 temperature 20 720 < th dose independent rect. 12 12
837 24.39 temperature 20 10 > th dose independent rect. 14 13
860 24.40 temperature 20 270 < th dose dependent rect. 15 13
878 24.41 temperature 20 720 < th dose dependent sin 19 NA
892 24.42 atmosphere 1010 10 < th dose independent rect. 22 10
897 24.42 temperature 20 1440 < th dose independent rect. 7 21
939 24.44 temperature 25 270 < th dose dependent rect. 15 8
947 24.45 temperature 20 1440 < th dose independent rect. 12 16
998 24.47 humidity 90 720 > th dose dependent rect. 5 1