Os12g0104200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0104200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.14 | 0.379 | 2.83 | 0.0388 | 0.123 | 0.233 | 2.3 | 2.79 | 0.0777 | 18.5 | 8.599 | 821 | -- | -- |
| 69.72 | 0.389 | 2.83 | 0.0426 | 0.0753 | 0.183 | 0.432 | -- | 0.0683 | 19.3 | 10.11 | 783 | -- | -- |
| 69.48 | 0.388 | 2.86 | 0.111 | 0.0597 | 0.107 | -- | 1.53 | 0.0473 | 5.64 | 9.981 | 1533 | -- | -- |
| 70.04 | 0.39 | 2.83 | 0.0634 | 0.0906 | 0.209 | -- | -- | 0.104 | 18.8 | 10.04 | 758 | -- | -- |
| 68.78 | 0.386 | 2.84 | 0.0239 | -- | 0.185 | -- | 1.51 | 0.0353 | -- | 9.51 | 1535 | -- | -- |
| 70.36 | 0.393 | 2.83 | 0.0404 | 0.0524 | -- | -0.417 | -- | 0.0693 | 5.81 | -- | -- | -- | -- |
| 70.76 | 0.394 | 2.83 | 0.0369 | 0.054 | -- | -- | -- | 0.0707 | 4.3 | -- | -- | -- | -- |
| 70.4 | 0.391 | 2.82 | 0.0539 | -- | 0.143 | -- | -- | 0.107 | -- | 10.11 | 1656 | -- | -- |
| 70.05 | 0.39 | 2.83 | -- | 0.0968 | 0.23 | -- | -- | 0.0996 | 18.5 | 7.65 | 770 | -- | -- |
| 70.92 | 0.393 | 2.83 | 0.0391 | -- | -- | -- | -- | 0.0721 | -- | -- | -- | -- | -- |
| 70.8 | 0.394 | 2.83 | -- | 0.0547 | -- | -- | -- | 0.0666 | 4.29 | -- | -- | -- | -- |
| 70.19 | 0.39 | 2.83 | -- | -- | 0.169 | -- | -- | 0.108 | -- | 1.621 | 1556 | -- | -- |
| 70.96 | 0.393 | 2.84 | -- | -- | -- | -- | -- | 0.0678 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.31 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 1 |
| 4 | 62.31 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 11 | 62.80 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 15 | 62.81 | wind | 5.0 | 30 | > th | dose dependent | rect. | 24 | 6 |
| 17 | 62.82 | wind | 5.0 | 30 | > th | dose independent | rect. | 24 | 4 |
| 20 | 62.82 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 26 | 62.83 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 28 | 62.83 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 29 | 62.85 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 33 | 62.85 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 63 | 63.56 | wind | 5.0 | 10 | > th | dose dependent | rect. | 22 | 6 |
| 91 | 64.16 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 109 | 64.52 | radiation | 10.0 | 720 | < th | dose independent | rect. | 12 | 12 |
| 125 | 64.63 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 12 | 13 |
| 143 | 64.69 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 146 | 64.73 | radiation | 10.0 | 720 | < th | dose independent | rect. | 12 | 4 |
| 147 | 64.74 | radiation | 10.0 | 720 | < th | dose independent | rect. | 12 | 19 |
| 166 | 64.92 | radiation | 10.0 | 720 | < th | dose independent | rect. | 13 | 2 |
| 175 | 64.96 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 209 | 65.27 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 233 | 65.42 | radiation | 10.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 240 | 65.44 | radiation | 10.0 | 720 | < th | dose independent | sin | 19 | NA |
| 250 | 65.47 | radiation | 10.0 | 720 | < th | dose independent | rect. | 4 | 20 |
| 258 | 65.49 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 266 | 65.53 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 12 | 19 |
| 272 | 65.55 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 275 | 65.55 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 12 | 17 |
| 277 | 65.56 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 302 | 65.63 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 307 | 65.64 | humidity | 90.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 330 | 65.67 | radiation | 10.0 | 720 | < th | dose independent | rect. | 9 | 7 |
| 353 | 65.72 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 355 | 65.72 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 384 | 65.76 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 389 | 65.76 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 2 |
| 427 | 65.80 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 429 | 65.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 432 | 65.80 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 436 | 65.80 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 445 | 65.80 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 446 | 65.80 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 447 | 65.80 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 460 | 65.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 489 | 65.83 | radiation | 10.0 | 720 | < th | dose independent | rect. | 4 | 14 |
| 501 | 65.84 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 4 | 21 |
| 507 | 65.86 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 15 |
| 513 | 65.86 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 514 | 65.86 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 13 | 3 |
| 534 | 65.90 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 540 | 65.90 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 560 | 65.92 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 15 | 3 |
| 566 | 65.93 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 572 | 65.94 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 613 | 65.98 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 618 | 65.98 | wind | 7.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 628 | 65.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 630 | 65.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 631 | 65.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 635 | 65.99 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 637 | 65.99 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 639 | 65.99 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 644 | 65.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 646 | 65.99 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 4 |
| 649 | 65.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 651 | 65.99 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 656 | 65.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 669 | 66.00 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 681 | 66.01 | radiation | 10.0 | 720 | < th | dose independent | rect. | 20 | 22 |
| 694 | 66.02 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 718 | 66.04 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 773 | 66.08 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 4 | 14 |
| 780 | 66.09 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 7 |
| 819 | 66.12 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 833 | 66.14 | radiation | 10.0 | 720 | < th | dose independent | no | NA | NA |
| 847 | 66.15 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 11 |
| 949 | 66.23 | temperature | 25.0 | 10 | < th | dose independent | rect. | 15 | 3 |
| 951 | 66.23 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 956 | 66.23 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 984 | 66.25 | radiation | 10.0 | 720 | > th | dose independent | sin | 19 | NA |
| 988 | 66.25 | radiation | 10.0 | 720 | > th | dose independent | rect. | 11 | 7 |