Os12g0103000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os12g0103000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.91 | 0.293 | 10.2 | 0.894 | 0.91 | -0.945 | 0.063 | 4.37 | 0.277 | 7.51 | 20.06 | 1780 | -- | -- |
| 49.92 | 0.329 | 10.3 | 0.0615 | 1.01 | -1.11 | -0.133 | -- | 0.112 | 7.35 | 11.88 | 9846 | -- | -- |
| 38.92 | 0.291 | 10.2 | 0.896 | 0.91 | -0.946 | -- | 4.37 | 0.277 | 7.5 | 20 | 1781 | -- | -- |
| 49.81 | 0.329 | 10.3 | 0.000425 | 0.984 | -1.08 | -- | -- | 0.106 | 7.29 | 10.6 | 9850 | -- | -- |
| 76.37 | 0.407 | 10.1 | 1.76 | -- | -1.62 | -- | 8.66 | 0.403 | -- | 24.76 | 1985 | -- | -- |
| 69.33 | 0.39 | 10.4 | -0.616 | 0.983 | -- | -0.0843 | -- | -0.236 | 7.49 | -- | -- | -- | -- |
| 69.35 | 0.39 | 10.4 | -0.618 | 0.983 | -- | -- | -- | -0.236 | 7.49 | -- | -- | -- | -- |
| 99.63 | 0.465 | 10.3 | 0.022 | -- | -1.14 | -- | -- | 0.123 | -- | 11.94 | 9322 | -- | -- |
| 49.8 | 0.329 | 10.3 | -- | 0.989 | -1.08 | -- | -- | 0.103 | 7.29 | 10.4 | 9874 | -- | -- |
| 120.99 | 0.514 | 10.4 | -0.603 | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
| 79.43 | 0.417 | 10.4 | -- | 0.977 | -- | -- | -- | -0.167 | 7.53 | -- | -- | -- | -- |
| 99.6 | 0.465 | 10.3 | -- | -- | -1.14 | -- | -- | 0.124 | -- | 10.05 | 9321 | -- | -- |
| 130.59 | 0.533 | 10.4 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.97 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 4 | 35.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 11 | 35.17 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 27 | 35.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 60 | 35.69 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 70 | 35.80 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 106 | 36.08 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 118 | 36.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 131 | 36.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 135 | 36.32 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 147 | 36.41 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 158 | 36.48 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 170 | 36.52 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 171 | 36.52 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 214 | 36.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 237 | 36.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 244 | 37.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 281 | 37.34 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 293 | 37.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 302 | 37.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 337 | 37.69 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 338 | 37.69 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 350 | 37.77 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 358 | 37.83 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 366 | 37.88 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 370 | 37.90 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 391 | 38.04 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 404 | 38.08 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 405 | 38.08 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 419 | 38.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 422 | 38.17 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 458 | 38.40 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 464 | 38.43 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 492 | 38.53 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 498 | 38.57 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 517 | 38.66 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 523 | 38.69 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 525 | 38.70 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 538 | 38.81 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 548 | 38.85 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 552 | 38.87 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 556 | 38.91 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 563 | 38.94 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 574 | 38.97 | wind | 7 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 581 | 39.00 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 585 | 39.01 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 610 | 39.09 | temperature | 15 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 617 | 39.12 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 644 | 39.17 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 663 | 39.22 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 665 | 39.23 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 701 | 39.33 | humidity | 90 | 14400 | < th | dose independent | sin | 12 | NA |
| 760 | 39.46 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 816 | 39.57 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 822 | 39.58 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 887 | 39.70 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 896 | 39.73 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 897 | 39.73 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 898 | 39.73 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 922 | 39.77 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 929 | 39.78 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 938 | 39.79 | temperature | 15 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 953 | 39.81 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 956 | 39.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 969 | 39.82 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 975 | 39.82 | radiation | 30 | 14400 | > th | dose dependent | rect. | 7 | 1 |