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Os12g0102300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to WRKY transcription factor 57.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0186) R2 : 0.00986
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0835 (0.0392) R2dN8 : 0.0127 R2N8 : 0.00986
σ : 0.351
deviance : 56.43
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.47 0.272 10.7 0.593 0.504 0.262 0.113 1.16 0.137 2.31 20.9 1538 -- --
35.91 0.281 10.7 0.371 0.539 0.132 0.14 -- 0.09 2.2 20.9 1538 -- --
33.48 0.269 10.7 0.599 0.505 0.254 -- 1.17 0.138 2.32 21 1490 -- --
35.98 0.281 10.7 0.367 0.539 0.13 -- -- 0.0897 2.24 20.9 1538 -- --
48.12 0.323 10.7 0.608 -- 0.278 -- 1.08 0.122 -- 21.5 2460 -- --
36.72 0.284 10.7 0.4 0.503 -- 0.11 -- 0.118 2.29 -- -- -- --
36.77 0.284 10.7 0.397 0.504 -- -- -- 0.118 2.32 -- -- -- --
49.46 0.328 10.7 0.316 -- 0.3 -- -- 0.0452 -- 24.79 2569 -- --
38.54 0.289 10.7 -- 0.509 0.272 -- -- 0.0176 2.36 21.1 1906 -- --
51.81 0.336 10.7 0.418 -- -- -- -- 0.13 -- -- -- -- --
40.93 0.299 10.7 -- 0.511 -- -- -- 0.0734 2.34 -- -- -- --
51.82 0.335 10.7 -- -- 0.383 -- -- -0.014 -- 24.7 2544 -- --
56.43 0.351 10.7 -- -- -- -- -- 0.0835 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.03 wind 1.0 10 > th dose dependent rect. 4 1
2 32.25 wind 7.0 1440 < th dose independent rect. 5 1
4 32.25 temperature 10.0 1440 > th dose independent rect. 5 1
7 32.25 temperature 30.0 1440 < th dose independent rect. 5 1
11 32.25 humidity 50.0 1440 > th dose independent rect. 5 1
20 32.25 atmosphere 995.0 1440 > th dose independent rect. 5 1
21 32.25 atmosphere 1015.0 1440 < th dose independent rect. 5 1
22 32.25 radiation 20.0 1440 < th dose independent rect. 5 1
31 32.25 temperature 10.0 1440 > th dose independent rect. 6 23
35 32.38 temperature 25.0 90 > th dose dependent rect. 4 1
36 32.40 temperature 25.0 90 > th dose independent rect. 4 1
38 32.41 temperature 25.0 10 > th dose independent rect. 4 1
41 32.57 temperature 25.0 30 < th dose independent rect. 4 1
42 32.57 humidity 90.0 30 > th dose independent rect. 4 1
43 32.61 humidity 90.0 10 < th dose independent rect. 4 1
45 32.62 temperature 25.0 10 > th dose independent rect. 2 3
49 32.66 wind 1.0 10 > th dose independent rect. 4 1
50 32.66 atmosphere 1000.0 10 > th dose independent rect. 5 23
52 32.69 atmosphere 1010.0 30 < th dose dependent rect. 4 1
55 32.75 wind 3.0 30 < th dose dependent rect. 4 1
57 32.81 temperature 25.0 10 > th dose dependent rect. 2 3
58 32.83 humidity 80.0 30 > th dose dependent rect. 4 1
61 32.84 temperature 30.0 30 < th dose dependent rect. 4 1
66 32.89 precipitation 0.1 10 < th dose independent rect. 4 1
67 32.89 precipitation 0.1 10 < th dose dependent rect. 4 1
69 32.90 humidity 90.0 90 < th dose dependent rect. 4 1
74 32.92 atmosphere 995.0 14400 > th dose independent rect. 18 1
80 32.93 atmosphere 1000.0 10 > th dose independent rect. 4 1
83 32.94 wind 9.0 30 < th dose independent rect. 4 1
85 32.94 temperature 10.0 30 > th dose independent rect. 4 1
88 32.94 humidity 50.0 30 > th dose independent rect. 4 1
92 32.94 atmosphere 1010.0 30 < th dose independent rect. 4 1
94 32.94 radiation 1.0 30 < th dose independent rect. 4 1
99 32.94 temperature 10.0 30 > th dose independent rect. 5 23
101 32.94 radiation 10.0 30 < th dose dependent rect. 4 1
105 32.95 atmosphere 1005.0 14400 > th dose independent rect. 11 1
132 32.97 wind 3.0 30 < th dose independent rect. 4 1
137 32.98 temperature 10.0 10 > th dose dependent rect. 4 1
143 33.01 atmosphere 995.0 14400 < th dose independent rect. 18 1
150 33.01 atmosphere 995.0 30 > th dose dependent rect. 4 1
151 33.01 atmosphere 995.0 14400 < th dose dependent rect. 18 1
159 33.03 wind 7.0 14400 < th dose independent rect. 11 1
164 33.03 wind 7.0 4320 < th dose independent rect. 20 8
165 33.03 wind 7.0 14400 > th dose dependent rect. 10 1
182 33.07 atmosphere 1005.0 14400 < th dose independent rect. 11 1
185 33.08 wind 7.0 4320 > th dose independent rect. 20 8
192 33.11 atmosphere 1005.0 14400 < th dose independent rect. 23 1
193 33.11 wind 7.0 4320 > th dose dependent rect. 20 8
209 33.20 wind 7.0 14400 > th dose dependent rect. 10 3
214 33.23 wind 7.0 14400 > th dose independent rect. 10 2
225 33.26 temperature 25.0 4320 > th dose independent rect. 24 1
234 33.28 temperature 25.0 4320 < th dose independent rect. 24 3
246 33.31 temperature 10.0 90 > th dose dependent rect. 5 22
249 33.32 wind 7.0 14400 > th dose dependent rect. 12 1
251 33.33 wind 7.0 4320 < th dose independent rect. 20 3
259 33.34 humidity 90.0 10 < th dose dependent rect. 4 1
263 33.35 wind 7.0 4320 > th dose independent rect. 20 3
319 33.39 wind 7.0 4320 > th dose dependent rect. 20 5
323 33.40 wind 7.0 4320 > th dose dependent rect. 20 3
330 33.41 atmosphere 995.0 14400 > th dose independent rect. 10 9
355 33.44 temperature 20.0 90 > th dose dependent rect. 6 21
377 33.48 atmosphere 1005.0 14400 > th dose independent rect. 4 1
405 33.50 temperature 20.0 1440 > th dose independent sin 16 NA
464 33.54 atmosphere 1005.0 14400 < th dose independent rect. 21 8
479 33.55 atmosphere 1005.0 14400 > th dose independent rect. 3 11
485 33.56 wind 9.0 14400 > th dose independent rect. 9 5
493 33.56 temperature 25.0 720 > th dose dependent rect. 23 18
504 33.57 atmosphere 1005.0 14400 < th dose independent rect. 21 17
506 33.58 atmosphere 1005.0 14400 < th dose independent rect. 4 1
513 33.58 temperature 20.0 1440 > th dose independent rect. 14 12
523 33.59 temperature 20.0 1440 < th dose independent sin 16 NA
538 33.59 atmosphere 1005.0 14400 > th dose independent rect. 23 15
574 33.60 temperature 10.0 270 > th dose dependent rect. 3 22
575 33.61 temperature 20.0 4320 > th dose independent rect. 20 2
582 33.61 temperature 20.0 1440 > th dose independent rect. 18 5
588 33.61 temperature 20.0 1440 > th dose independent rect. 18 7
619 33.62 temperature 20.0 4320 < th dose independent rect. 20 2
626 33.62 temperature 30.0 720 > th dose independent rect. 8 6
656 33.62 precipitation 0.1 14400 > th dose dependent rect. 17 1
722 33.64 temperature 30.0 720 > th dose independent rect. 10 4
757 33.65 atmosphere 1005.0 14400 < th dose independent rect. 3 11
766 33.65 atmosphere 1005.0 14400 < th dose independent rect. 11 18
811 33.66 temperature 25.0 720 > th dose dependent rect. 5 12
813 33.67 atmosphere 1005.0 14400 > th dose independent sin 4 NA
830 33.67 temperature 20.0 1440 < th dose independent rect. 14 14
867 33.68 temperature 20.0 1440 < th dose independent rect. 18 5
872 33.68 temperature 20.0 1440 < th dose independent rect. 18 7
921 33.69 temperature 20.0 1440 < th dose independent rect. 14 11
955 33.70 atmosphere 1005.0 14400 < th dose independent sin 7 NA
956 33.70 atmosphere 1005.0 14400 < th dose independent sin 10 NA
960 33.70 atmosphere 1005.0 14400 < th dose independent sin 4 NA
966 33.70 temperature 20.0 1440 < th dose independent rect. 16 9
970 33.70 temperature 20.0 1440 < th dose independent rect. 18 11
1000 33.70 atmosphere 1005.0 14400 < th dose independent rect. 1 23