Os11g0708000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0708000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.61 | 0.392 | 11.5 | 0.453 | 0.533 | -1.18 | -0.0651 | 1.16 | 0.522 | 22.3 | 25.9 | 211 | -- | -- |
| 69.96 | 0.39 | 11.6 | 0.326 | 0.536 | -1.06 | -0.0685 | -- | 0.492 | 22.4 | 25.96 | 210 | -- | -- |
| 69.62 | 0.389 | 11.5 | 0.453 | 0.532 | -1.18 | -- | 1.2 | 0.518 | 22.3 | 25.99 | 206 | -- | -- |
| 69.98 | 0.39 | 11.6 | 0.327 | 0.537 | -1.06 | -- | -- | 0.49 | 22.4 | 25.97 | 211 | -- | -- |
| 78.97 | 0.416 | 11.5 | 0.532 | -- | -1.42 | -- | 1.8 | 0.556 | -- | 25.8 | 22 | -- | -- |
| 88.2 | 0.44 | 11.6 | 0.174 | 0.676 | -- | 0.227 | -- | 0.45 | 1.12 | -- | -- | -- | -- |
| 88.41 | 0.44 | 11.6 | 0.166 | 0.676 | -- | -- | -- | 0.449 | 1.06 | -- | -- | -- | -- |
| 80.13 | 0.419 | 11.5 | 0.356 | -- | -1.27 | -- | -- | 0.515 | -- | 25.7 | 17 | -- | -- |
| 72.67 | 0.397 | 11.6 | -- | 0.545 | -0.992 | -- | -- | 0.444 | 22.8 | 26.24 | 213 | -- | -- |
| 116.77 | 0.505 | 11.6 | 0.192 | -- | -- | -- | -- | 0.462 | -- | -- | -- | -- | -- |
| 89.14 | 0.442 | 11.6 | -- | 0.678 | -- | -- | -- | 0.431 | 1.07 | -- | -- | -- | -- |
| 83.41 | 0.427 | 11.6 | -- | -- | -1.22 | -- | -- | 0.474 | -- | 25.7 | 17 | -- | -- |
| 117.74 | 0.506 | 11.6 | -- | -- | -- | -- | -- | 0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.87 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 9 | 70.00 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 14 |
| 30 | 70.21 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 37 | 70.27 | temperature | 25.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 66 | 70.45 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 85 | 70.56 | temperature | 25.0 | 270 | > th | dose dependent | no | NA | NA |
| 88 | 70.56 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 138 | 70.83 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 140 | 70.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 23 |
| 193 | 71.25 | temperature | 30.0 | 270 | < th | dose independent | sin | 0 | NA |
| 198 | 71.28 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 211 | 71.42 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 13 |
| 225 | 71.56 | temperature | 30.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 247 | 71.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 250 | 71.75 | temperature | 30.0 | 270 | < th | dose independent | no | NA | NA |
| 269 | 71.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 23 |
| 273 | 71.88 | temperature | 30.0 | 270 | > th | dose independent | sin | 0 | NA |
| 275 | 71.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 23 |
| 318 | 72.09 | temperature | 30.0 | 270 | > th | dose independent | no | NA | NA |
| 319 | 72.09 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 11 |
| 460 | 72.21 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 502 | 72.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 507 | 72.36 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 7 |
| 508 | 72.36 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 514 | 72.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 537 | 72.42 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 542 | 72.44 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 566 | 72.53 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 645 | 72.77 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 664 | 72.83 | temperature | 10.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 673 | 72.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 16 |
| 709 | 72.95 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 721 | 72.97 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 763 | 73.07 | temperature | 30.0 | 720 | < th | dose independent | sin | 7 | NA |
| 771 | 73.08 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 792 | 73.14 | temperature | 30.0 | 720 | > th | dose independent | sin | 6 | NA |
| 829 | 73.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 9 |
| 846 | 73.27 | temperature | 25.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 934 | 73.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |