Os11g0706100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF37 family protein.
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Os11g0706100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF37 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.11 | 0.333 | 9.28 | 0.397 | 0.568 | -0.754 | -0.642 | 2.26 | 0.142 | 23.7 | 25.63 | 1332 | -- | -- |
| 51.95 | 0.336 | 9.37 | -0.206 | 0.575 | -0.526 | -0.562 | -- | -0.0382 | 23.5 | 26.56 | 2674 | -- | -- |
| 51.79 | 0.335 | 9.29 | 0.381 | 0.571 | -0.741 | -- | 2.13 | 0.124 | 23.5 | 25.98 | 1337 | -- | -- |
| 52.83 | 0.339 | 9.32 | -0.0946 | 0.544 | -0.562 | -- | -- | 0.172 | 23.4 | 23.1 | 8410 | -- | -- |
| 69.53 | 0.39 | 9.32 | -0.0324 | -- | -0.844 | -- | 2.29 | 0.0372 | -- | 25.98 | 1337 | -- | -- |
| 63.03 | 0.372 | 9.36 | -0.376 | 0.506 | -- | -0.643 | -- | -0.0452 | 23.5 | -- | -- | -- | -- |
| 64.74 | 0.377 | 9.36 | -0.349 | 0.511 | -- | -- | -- | -0.0417 | 23.2 | -- | -- | -- | -- |
| 66.95 | 0.383 | 9.33 | -0.208 | -- | -0.75 | -- | -- | 0.066 | -- | 23 | 7365 | -- | -- |
| 53.01 | 0.339 | 9.31 | -- | 0.549 | -0.589 | -- | -- | 0.188 | 23.4 | 22.8 | 8412 | -- | -- |
| 81.06 | 0.421 | 9.35 | -0.337 | -- | -- | -- | -- | -0.0372 | -- | -- | -- | -- | -- |
| 67.95 | 0.386 | 9.36 | -- | 0.508 | -- | -- | -- | -0.00284 | 23.2 | -- | -- | -- | -- |
| 66.2 | 0.38 | 9.32 | -- | -- | -0.836 | -- | -- | 0.112 | -- | 21.78 | 8803 | -- | -- |
| 84.04 | 0.428 | 9.34 | -- | -- | -- | -- | -- | 0.000171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 3 | 46.41 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 4 | 46.68 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 13 | 47.42 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 14 | 47.46 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 16 | 47.53 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 24 | 47.69 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 35 | 47.81 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 38 | 47.85 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 39 | 47.85 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 42 | 47.93 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 47 | 48.01 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 53 | 48.05 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 18 |
| 54 | 48.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 55 | 48.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 59 | 48.21 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 65 | 48.34 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 68 | 48.37 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 71 | 48.40 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 74 | 48.42 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 76 | 48.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 87 | 48.49 | wind | 5.0 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 88 | 48.49 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 89 | 48.49 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 92 | 48.50 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 97 | 48.51 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 102 | 48.52 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 124 | 48.55 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 128 | 48.55 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 146 | 48.58 | wind | 5.0 | 43200 | > th | dose independent | rect. | 14 | 17 |
| 153 | 48.60 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 154 | 48.61 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 157 | 48.61 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 165 | 48.64 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 190 | 48.69 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 229 | 48.77 | wind | 5.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 230 | 48.77 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 260 | 48.81 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 271 | 48.83 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 305 | 48.88 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 325 | 48.91 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 327 | 48.91 | wind | 3.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 333 | 48.92 | wind | 1.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 344 | 48.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 359 | 48.95 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 363 | 48.95 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 370 | 48.96 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 405 | 48.99 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 406 | 48.99 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 407 | 48.99 | wind | 5.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 414 | 49.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 429 | 49.01 | wind | 5.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 430 | 49.01 | wind | 5.0 | 43200 | > th | dose independent | rect. | 4 | 17 |
| 438 | 49.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 442 | 49.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 446 | 49.03 | wind | 5.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 448 | 49.03 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 451 | 49.03 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 452 | 49.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 454 | 49.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 461 | 49.04 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 470 | 49.05 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 474 | 49.05 | wind | 3.0 | 43200 | > th | dose dependent | no | NA | NA |
| 499 | 49.07 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 522 | 49.09 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 523 | 49.09 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 538 | 49.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 553 | 49.11 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 554 | 49.11 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 14 |
| 558 | 49.11 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 640 | 49.18 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 685 | 49.21 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 700 | 49.22 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 19 |
| 762 | 49.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 769 | 49.26 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 795 | 49.28 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 797 | 49.28 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 804 | 49.28 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 805 | 49.29 | wind | 5.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 807 | 49.29 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 817 | 49.29 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 830 | 49.30 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 853 | 49.31 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 861 | 49.31 | wind | 9.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 901 | 49.33 | wind | 9.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 929 | 49.35 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |