Os11g0704600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39).
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Os11g0704600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.87 | 0.373 | 12 | 0.707 | 0.711 | -0.268 | -0.472 | 5.89 | -0.19 | 19 | 25.68 | 3499 | -- | -- |
| 70.64 | 0.391 | 12.2 | -0.903 | 0.691 | 0.396 | -0.348 | -- | -0.649 | 19 | 25.7 | 47520 | -- | -- |
| 63.2 | 0.37 | 11.9 | 0.849 | 0.72 | -0.372 | -- | 6.66 | -0.188 | 19.1 | 26.6 | 3250 | -- | -- |
| 68.82 | 0.386 | 12.1 | -0.655 | 0.714 | 0.406 | -- | -- | -0.391 | 18.6 | 30.09 | 3175 | -- | -- |
| 89.94 | 0.442 | 11.9 | 0.76 | -- | -0.336 | -- | 6.69 | -0.193 | -- | 26.7 | 3532 | -- | -- |
| 73.93 | 0.403 | 12.1 | -0.503 | 0.689 | -- | -0.343 | -- | -0.452 | 19.1 | -- | -- | -- | -- |
| 74.23 | 0.403 | 12.1 | -0.496 | 0.688 | -- | -- | -- | -0.453 | 19.2 | -- | -- | -- | -- |
| 91.76 | 0.446 | 12.1 | -0.63 | -- | 0.502 | -- | -- | -0.44 | -- | 28.2 | 2074 | -- | -- |
| 77.39 | 0.41 | 12.1 | -- | 0.696 | 0.34 | -- | -- | -0.324 | 18.9 | 30.2 | 3352 | -- | -- |
| 99.22 | 0.465 | 12.1 | -0.509 | -- | -- | -- | -- | -0.465 | -- | -- | -- | -- | -- |
| 80.72 | 0.42 | 12.1 | -- | 0.693 | -- | -- | -- | -0.397 | 19.1 | -- | -- | -- | -- |
| 96.99 | 0.459 | 12.1 | -- | -- | 0.559 | -- | -- | -0.431 | -- | 25.3 | 593 | -- | -- |
| 106.06 | 0.481 | 12.1 | -- | -- | -- | -- | -- | -0.408 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.74 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 15 | 61.81 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 16 | 61.82 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 17 | 61.84 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 18 | 61.87 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 20 | 61.94 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 24 | 61.95 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 15 |
| 25 | 61.97 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 27 | 62.00 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 29 | 62.02 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 30 | 62.03 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 39 | 62.06 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 42 | 62.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 50 | 62.13 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 52 | 62.18 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 58 | 62.20 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 64 | 62.22 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 65 | 62.22 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 68 | 62.24 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 74 | 62.27 | wind | 5.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 77 | 62.29 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 78 | 62.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 81 | 62.31 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 83 | 62.31 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 13 |
| 87 | 62.32 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 96 | 62.32 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 17 | 17 |
| 105 | 62.34 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 15 |
| 106 | 62.35 | wind | 5.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 110 | 62.37 | wind | 5.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 118 | 62.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 121 | 62.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 122 | 62.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 123 | 62.40 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 149 | 62.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 154 | 62.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 155 | 62.51 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 163 | 62.54 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 172 | 62.56 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 178 | 62.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 181 | 62.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 192 | 62.60 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 203 | 62.62 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 215 | 62.63 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 225 | 62.65 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 232 | 62.65 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 239 | 62.67 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 240 | 62.67 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 242 | 62.68 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 247 | 62.69 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 316 | 62.75 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 317 | 62.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 318 | 62.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 322 | 62.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 334 | 62.77 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 341 | 62.77 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 342 | 62.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 349 | 62.79 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 351 | 62.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 359 | 62.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 377 | 62.81 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 379 | 62.81 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 394 | 62.82 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 395 | 62.82 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 19 |
| 396 | 62.83 | radiation | 30.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 441 | 62.88 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 534 | 62.96 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 572 | 63.01 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 17 | NA |
| 574 | 63.01 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 609 | 63.06 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 619 | 63.07 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 652 | 63.11 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 667 | 63.12 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 669 | 63.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 688 | 63.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 692 | 63.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 712 | 63.16 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 795 | 63.23 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 819 | 63.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 10 |
| 850 | 63.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 12 |
| 901 | 63.30 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 925 | 63.32 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 964 | 63.35 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 966 | 63.36 | radiation | 20.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 970 | 63.36 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 13 |