Os11g0704000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SelT/selW/selH selenoprotein family protein.
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Os11g0704000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SelT/selW/selH selenoprotein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.05 | 0.538 | 8.69 | 0.255 | 0.602 | -1.47 | -0.522 | -0.683 | 0.187 | 19 | 19.54 | 1239 | -- | -- |
| 131.52 | 0.534 | 8.67 | 0.427 | 0.611 | -1.52 | -0.528 | -- | 0.244 | 19 | 19.4 | 1236 | -- | -- |
| 131.65 | 0.534 | 8.7 | 0.224 | 0.601 | -1.5 | -- | -0.883 | 0.174 | 19 | 19 | 1224 | -- | -- |
| 132.22 | 0.536 | 8.67 | 0.462 | 0.622 | -1.53 | -- | -- | 0.244 | 19.1 | 19.4 | 1204 | -- | -- |
| 149.75 | 0.57 | 8.69 | 0.221 | -- | -1.49 | -- | -0.874 | 0.154 | -- | 19.08 | 1320 | -- | -- |
| 194.05 | 0.653 | 8.74 | -0.0702 | 0.664 | -- | -0.359 | -- | -0.0944 | 17.9 | -- | -- | -- | -- |
| 194.35 | 0.653 | 8.74 | -0.0671 | 0.662 | -- | -- | -- | -0.0956 | 17.8 | -- | -- | -- | -- |
| 150.3 | 0.571 | 8.66 | 0.458 | -- | -1.51 | -- | -- | 0.234 | -- | 19.54 | 1314 | -- | -- |
| 136.92 | 0.545 | 8.69 | -- | 0.629 | -1.36 | -- | -- | 0.159 | 19.2 | 20.26 | 1178 | -- | -- |
| 217.1 | 0.688 | 8.73 | -0.0877 | -- | -- | -- | -- | -0.111 | -- | -- | -- | -- | -- |
| 194.47 | 0.652 | 8.74 | -- | 0.663 | -- | -- | -- | -0.0882 | 17.8 | -- | -- | -- | -- |
| 155.08 | 0.58 | 8.67 | -- | -- | -1.33 | -- | -- | 0.157 | -- | 20.46 | 1312 | -- | -- |
| 217.3 | 0.688 | 8.73 | -- | -- | -- | -- | -- | -0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 5 | 132.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 81 | 132.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 117 | 132.77 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 120 | 132.78 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 131 | 132.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 149 | 132.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 416 | 133.29 | temperature | 15 | 1440 | > th | dose dependent | sin | 6 | NA |
| 582 | 133.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 735 | 134.23 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 746 | 134.27 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 4 |
| 778 | 134.34 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 830 | 134.46 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 962 | 134.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 968 | 134.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 9 |