Os11g0703900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein 70.
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Os11g0703900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein 70.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.19 | 0.365 | 14.4 | 1.5 | 0.262 | 1.17 | -0.262 | -0.204 | 0.447 | 16.6 | 20.02 | 4352 | -- | -- |
| 60.24 | 0.361 | 14.4 | 1.54 | 0.262 | 1.21 | -0.259 | -- | 0.455 | 16.6 | 20.09 | 4351 | -- | -- |
| 60.32 | 0.362 | 14.4 | 1.49 | 0.249 | 1.18 | -- | -0.214 | 0.442 | 16.9 | 20.02 | 4529 | -- | -- |
| 60.4 | 0.362 | 14.4 | 1.53 | 0.26 | 1.21 | -- | -- | 0.455 | 16.8 | 20.04 | 4357 | -- | -- |
| 63.45 | 0.371 | 14.4 | 1.48 | -- | 1.18 | -- | -0.228 | 0.435 | -- | 20.1 | 4642 | -- | -- |
| 85.82 | 0.434 | 14.4 | 2.28 | 0.232 | -- | -0.148 | -- | 0.785 | 16.7 | -- | -- | -- | -- |
| 85.86 | 0.434 | 14.4 | 2.28 | 0.232 | -- | -- | -- | 0.784 | 16.9 | -- | -- | -- | -- |
| 63.5 | 0.371 | 14.4 | 1.6 | -- | 1.18 | -- | -- | 0.479 | -- | 19.9 | 3269 | -- | -- |
| 66.58 | 0.38 | 14.5 | -- | 0.25 | 2.02 | -- | -- | 0.0665 | 16.6 | 18.19 | 47520 | -- | -- |
| 88.71 | 0.44 | 14.4 | 2.27 | -- | -- | -- | -- | 0.778 | -- | -- | -- | -- | -- |
| 222.81 | 0.698 | 14.4 | -- | 0.193 | -- | -- | -- | 0.53 | 17.3 | -- | -- | -- | -- |
| 69.89 | 0.389 | 14.5 | -- | -- | 2.02 | -- | -- | 0.0658 | -- | 18.05 | 47520 | -- | -- |
| 224.75 | 0.7 | 14.4 | -- | -- | -- | -- | -- | 0.526 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.12 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 6 | 59.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 20 | 59.37 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 30 | 59.44 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 266 | 60.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 274 | 60.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 287 | 60.21 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 296 | 60.24 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 311 | 60.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 23 |
| 315 | 60.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 320 | 60.31 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 23 |
| 333 | 60.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 568 | 61.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 572 | 61.23 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 6 |
| 588 | 61.27 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 642 | 61.48 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 649 | 61.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 2 |
| 660 | 61.53 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 677 | 61.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 763 | 61.79 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 766 | 61.80 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 771 | 61.82 | temperature | 15 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 774 | 61.82 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 22 |
| 806 | 61.90 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 823 | 61.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 837 | 61.96 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 8 |