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Os11g0702100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Class III chitinase homologue (OsChib3H-h) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.19 (0.0543) R2 : 0.432
β1 : -1.78 (0.202) R2dD : 0.11 R2D : 0.175
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.06 (0.161) R2dE : 0.266 R2E : 0.317
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0842 (0.126) R2dN8 : 0.000924 R2N8 : -0.00694
σ : 0.987
deviance : 449.42
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C
peak time of C : --
E
wheather : temperature
threshold : 24.72
memory length : 1593
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 9.87
open length of G : 11.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
423.15 0.966 6.11 -1.2 0.0234 1.94 -2.67 -1.88 0.292 18.2 24.9 1459 10.4 11.2
434.96 0.971 6.13 -1.57 0.157 2.22 2.56 -- 0.21 5.4 24.5 1576 10.6 11.1
435.48 0.972 6.12 -1.03 0.242 2.23 -- -2.24 0.281 3.27 24.81 1605 10.4 10.8
446.65 0.984 6.19 -1.77 0.216 2.09 -- -- 0.0936 1.28 24.71 1593 9.82 11.5
437.55 0.974 6.11 -1.09 -- 2.12 -- -2.27 0.297 -- 24.84 1579 10.5 11
594.84 1.14 6.35 -2.54 0.079 -- -2.64 -- -0.631 17.9 -- -- -- --
611.65 1.16 6.36 -2.52 0.0878 -- -- -- -0.642 20.7 -- -- -- --
449.42 0.987 6.19 -1.78 -- 2.06 -- -- 0.0842 -- 24.72 1593 9.87 11.4
523.9 1.07 6.15 -- 0.241 2.43 -- -- 0.252 1.19 24.8 1592 8.96 11.8
612.09 1.16 6.35 -2.52 -- -- -- -- -0.643 -- -- -- -- --
779.47 1.31 6.29 -- 0.107 -- -- -- -0.361 18.9 -- -- -- --
524.17 1.07 6.13 -- -- 2.58 -- -- 0.423 -- 24.72 1695 9.08 12.1
780.07 1.3 6.29 -- -- -- -- -- -0.363 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 386.80 wind 1 43200 < th dose independent rect. 7 1
2 391.92 wind 1 43200 > th dose independent rect. 7 1
3 392.28 wind 1 43200 < th dose dependent rect. 6 2
7 422.52 radiation 10 43200 < th dose independent rect. 20 9
18 424.36 radiation 1 43200 > th dose independent rect. 4 1
29 424.36 radiation 1 43200 > th dose dependent rect. 4 1
39 424.73 radiation 10 14400 < th dose dependent rect. 5 1
40 424.78 radiation 40 14400 < th dose dependent rect. 5 1
47 425.08 radiation 10 43200 < th dose independent rect. 3 2
53 425.19 radiation 10 14400 < th dose dependent rect. 22 8
55 425.22 radiation 10 14400 < th dose dependent rect. 1 5
60 425.27 radiation 10 14400 < th dose dependent rect. 19 11
69 425.33 radiation 1 14400 > th dose dependent rect. 18 12
87 425.61 wind 7 43200 > th dose dependent rect. 11 1
96 425.96 radiation 10 43200 < th dose independent rect. 18 7
109 426.36 temperature 25 1440 < th dose independent rect. 10 11
115 426.78 radiation 10 43200 < th dose independent rect. 18 1
119 427.34 radiation 40 43200 < th dose dependent rect. 18 14
120 427.52 radiation 10 14400 < th dose independent rect. 16 15
133 427.68 temperature 25 1440 > th dose independent rect. 10 11
134 427.73 temperature 25 1440 < th dose independent rect. 15 6
162 428.16 radiation 1 43200 > th dose dependent rect. 18 14
183 428.30 radiation 30 43200 > th dose independent rect. 7 2
229 428.53 radiation 10 43200 > th dose dependent rect. 16 16
260 429.15 humidity 70 43200 > th dose independent rect. 8 1
270 429.34 radiation 20 43200 < th dose dependent sin 11 NA
287 429.69 radiation 10 43200 < th dose independent rect. 9 21
305 429.81 radiation 10 14400 < th dose independent rect. 6 1
316 429.87 temperature 25 1440 > th dose independent rect. 15 5
335 429.97 temperature 25 1440 > th dose independent rect. 13 8
341 430.04 radiation 30 43200 > th dose dependent rect. 7 2
369 430.23 radiation 10 43200 < th dose independent rect. 18 18
387 430.48 radiation 10 43200 < th dose independent rect. 9 11
388 430.48 radiation 10 43200 < th dose independent rect. 9 15
406 430.57 radiation 10 43200 < th dose independent rect. 15 21
439 430.69 radiation 1 43200 > th dose dependent sin 11 NA
458 430.78 wind 7 43200 > th dose independent rect. 11 2
493 430.99 radiation 10 43200 < th dose independent rect. 17 23
523 431.09 radiation 10 43200 < th dose independent rect. 4 15
536 431.09 radiation 10 43200 < th dose independent rect. 22 21
539 431.09 radiation 10 43200 < th dose independent rect. 1 23
544 431.10 radiation 10 43200 < th dose independent no NA NA
580 431.17 radiation 10 43200 < th dose independent sin 20 NA
581 431.17 radiation 10 43200 < th dose independent rect. 4 8
583 431.17 radiation 10 43200 < th dose independent rect. 22 14
662 431.47 radiation 40 43200 < th dose independent rect. 16 16
812 431.92 radiation 40 43200 < th dose independent rect. 14 19
813 431.92 radiation 30 43200 > th dose dependent sin 12 NA
836 432.05 humidity 70 43200 < th dose independent rect. 8 1
906 432.46 radiation 40 43200 < th dose independent rect. 20 12
911 432.57 radiation 40 43200 < th dose independent rect. 22 10
929 432.64 radiation 10 43200 < th dose independent rect. 13 17
942 432.65 radiation 30 43200 > th dose dependent rect. 14 20
958 432.70 radiation 40 43200 < th dose independent rect. 7 1
974 432.82 radiation 40 43200 < th dose independent rect. 15 10
976 432.82 radiation 40 43200 < th dose independent rect. 15 13
998 432.97 radiation 40 43200 < th dose independent rect. 15 2