Os11g0702000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0702000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66 | 0.382 | 3.13 | -0.0105 | 0.0925 | -0.888 | 0.148 | 3.24 | 0.00404 | 8.59 | 50.17 | 8 | -- | -- |
| 69.36 | 0.388 | 3.12 | -0.0191 | 0.0886 | -0.408 | -0.0419 | -- | -0.00263 | 8.46 | 51 | 6 | -- | -- |
| 65.57 | 0.377 | 3.12 | -0.00126 | 0.0898 | -0.837 | -- | 3.01 | 0.00508 | 8.16 | 50 | 6 | -- | -- |
| 69.31 | 0.388 | 3.12 | -0.0231 | 0.0984 | -0.424 | -- | -- | -0.00399 | 7.28 | 51.28 | 6 | -- | -- |
| 66.04 | 0.379 | 3.13 | 0.000612 | -- | -0.84 | -- | 3.02 | 0.00639 | -- | 50.08 | 6 | -- | -- |
| 71.53 | 0.397 | 3.12 | -0.019 | 0.097 | -- | -0.0668 | -- | -0.0208 | 8.87 | -- | -- | -- | -- |
| 71.55 | 0.396 | 3.12 | -0.0211 | 0.097 | -- | -- | -- | -0.0207 | 8.99 | -- | -- | -- | -- |
| 69.82 | 0.389 | 3.12 | -0.0214 | -- | -0.416 | -- | -- | -0.00263 | -- | 51.25 | 6 | -- | -- |
| 69.33 | 0.388 | 3.12 | -- | 0.098 | -0.424 | -- | -- | -0.00135 | 7.3 | 51.27 | 6 | -- | -- |
| 72.09 | 0.397 | 3.12 | -0.0212 | -- | -- | -- | -- | -0.0201 | -- | -- | -- | -- | -- |
| 71.56 | 0.396 | 3.12 | -- | 0.097 | -- | -- | -- | -0.0184 | 9 | -- | -- | -- | -- |
| 69.84 | 0.389 | 3.12 | -- | -- | -0.416 | -- | -- | -0.000225 | -- | 51.22 | 6 | -- | -- |
| 72.1 | 0.396 | 3.12 | -- | -- | -- | -- | -- | -0.0178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.46 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 3 | 58.52 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 6 | 58.71 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 8 | 58.82 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 11 | 58.90 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 21 | 58.90 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 40 | 59.22 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 49 | 60.83 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 50 | 60.83 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 51 | 60.85 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 53 | 61.20 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 165 | 61.96 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 0 | NA |
| 268 | 62.05 | humidity | 60 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 558 | 62.72 | humidity | 60 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 565 | 62.80 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 569 | 62.90 | humidity | 50 | 10 | > th | dose independent | sin | 8 | NA |
| 596 | 63.21 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 662 | 64.09 | wind | 9 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 785 | 64.58 | humidity | 70 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 788 | 64.65 | humidity | 60 | 270 | < th | dose independent | rect. | 10 | 1 |
| 796 | 64.83 | humidity | 70 | 4320 | > th | dose independent | rect. | 24 | 7 |
| 801 | 64.89 | humidity | 60 | 720 | < th | dose independent | rect. | 19 | 16 |
| 806 | 64.95 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 833 | 65.17 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 843 | 65.19 | humidity | 70 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 857 | 65.24 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 4 |
| 858 | 65.24 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 864 | 65.27 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 868 | 65.30 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 879 | 65.35 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 883 | 65.39 | humidity | 50 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 904 | 65.45 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 913 | 65.50 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 921 | 65.54 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 989 | 65.54 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |