Os11g0700500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Snapdragon myb protein 305 homolog.
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Os11g0700500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Snapdragon myb protein 305 homolog.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 234.42 | 0.719 | 9.82 | 1.47 | 1.65 | -2.28 | -1.99 | 3.82 | 0.433 | 7.28 | 21.2 | 812 | 2.28 | -- |
| 257.91 | 0.748 | 9.72 | 2.31 | 1.66 | -2.6 | -0.00858 | -- | 0.637 | 7.44 | 21.5 | 749 | 7.06e-06 | -- |
| 241.86 | 0.724 | 9.79 | 1.66 | 1.58 | -2.2 | -- | 2.97 | 0.521 | 7.27 | 21.1 | 859 | 1.97 | -- |
| 257.75 | 0.748 | 9.71 | 2.3 | 1.66 | -2.62 | -- | -- | 0.656 | 7.44 | 21.4 | 751 | 0.000394 | -- |
| 347.55 | 0.868 | 9.86 | 1.35 | -- | -1.97 | -- | 3.38 | 0.431 | -- | 21.3 | 1101 | 1.9 | -- |
| 412.33 | 0.952 | 9.62 | 2.99 | 1.37 | -- | -1.27 | -- | 1.2 | 5.45 | -- | -- | -- | -- |
| 415.83 | 0.955 | 9.61 | 2.99 | 1.37 | -- | -- | -- | 1.2 | 5.7 | -- | -- | -- | -- |
| 376.6 | 0.904 | 9.75 | 2.35 | -- | -2.27 | -- | -- | 0.675 | -- | 21.21 | 1007 | 0.231 | -- |
| 392.78 | 0.923 | 9.68 | -- | 1.72 | -3.04 | -- | -- | 0.691 | 7.5 | 21.2 | 787 | 6.68e-07 | -- |
| 513.27 | 1.06 | 9.63 | 3.03 | -- | -- | -- | -- | 1.24 | -- | -- | -- | -- | -- |
| 651.17 | 1.19 | 9.68 | -- | 1.42 | -- | -- | -- | 0.871 | 5.61 | -- | -- | -- | -- |
| 404.38 | 0.937 | 9.86 | -- | -- | -3.18 | -- | -- | 0.231 | -- | 18.37 | 22601 | 0.429 | -- |
| 755.68 | 1.28 | 9.71 | -- | -- | -- | -- | -- | 0.9 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.72 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 2 | 235.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 3 | 235.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 24 | 238.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 39 | 240.30 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 40 | 240.36 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 46 | 240.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 131 | 247.17 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 153 | 248.48 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 9 |
| 201 | 251.72 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 334 | 259.53 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 341 | 259.76 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |