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Os11g0696600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heat shock protein Hsp70 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0225) R2 : 0.624
β1 : -2.28 (0.0845) R2dD : 0.685 R2D : 0.495
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.13 (0.0995) R2dE : 0.134 R2E : -0.0473
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.297 (0.0517) R2dN8 : 0.044 R2N8 : -0.0726
σ : 0.412
deviance : 78.31
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C
peak time of C : --
E
wheather : temperature
threshold : 26.5
memory length : 220
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
75.38 0.408 10.9 -2.39 0.304 -1.32 0.177 0.358 -0.346 3.06 28.25 131 -- --
75.41 0.404 10.9 -2.33 0.281 -1.31 0.282 -- -0.335 3.13 27.83 144 -- --
75.33 0.404 10.9 -2.41 0.28 -1.31 -- 0.441 -0.348 3.32 27.9 160 -- --
75.59 0.405 10.9 -2.33 0.285 -1.32 -- -- -0.334 3.33 27.72 160 -- --
78.1 0.412 10.9 -2.36 -- -1.1 -- 0.42 -0.311 -- 26.76 220 -- --
99.83 0.468 10.8 -1.99 0.0936 -- -0.182 -- -0.0504 15.5 -- -- -- --
99.94 0.468 10.8 -2 0.0928 -- -- -- -0.0514 15.6 -- -- -- --
78.31 0.412 10.8 -2.28 -- -1.13 -- -- -0.297 -- 26.5 220 -- --
203.31 0.668 10.8 -- 0.0555 -0.326 -- -- 0.109 18.4 27.72 160 -- --
100.41 0.468 10.8 -2 -- -- -- -- -0.0539 -- -- -- -- --
204.98 0.67 10.7 -- 0.132 -- -- -- 0.171 15.5 -- -- -- --
203.15 0.666 10.8 -- -- -0.358 -- -- 0.109 -- 29.7 9 -- --
205.96 0.67 10.7 -- -- -- -- -- 0.168 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.71 temperature 15 270 > th dose dependent rect. 17 22
4 75.21 temperature 30 90 < th dose dependent rect. 23 22
7 75.39 temperature 30 270 < th dose dependent rect. 21 22
12 75.73 temperature 30 10 < th dose dependent rect. 11 23
15 75.75 temperature 30 90 < th dose dependent rect. 19 23
18 76.00 temperature 30 10 < th dose dependent rect. 15 23
21 76.09 temperature 30 90 < th dose dependent no NA NA
22 76.11 wind 9 14400 > th dose independent rect. 23 14
23 76.11 wind 9 14400 > th dose dependent rect. 5 8
26 76.16 temperature 30 10 < th dose dependent no NA NA
27 76.20 temperature 30 90 < th dose dependent rect. 13 23
28 76.21 wind 9 14400 > th dose independent rect. 4 9
32 76.23 wind 9 14400 < th dose independent rect. 4 9
34 76.24 temperature 30 10 < th dose dependent rect. 19 23
45 76.37 temperature 20 90 > th dose dependent rect. 20 19
47 76.43 temperature 20 10 > th dose dependent rect. 21 18
50 76.46 temperature 30 90 < th dose dependent rect. 9 23
52 76.50 wind 3 43200 > th dose independent rect. 1 1
53 76.50 wind 9 14400 < th dose independent rect. 23 14
62 76.61 temperature 20 270 > th dose dependent rect. 20 16
65 76.65 temperature 30 90 < th dose dependent sin 4 NA
69 76.69 temperature 30 10 < th dose dependent rect. 23 23
71 76.72 temperature 10 270 > th dose dependent rect. 5 22
89 76.92 temperature 30 10 < th dose dependent rect. 1 23
90 76.93 wind 9 14400 > th dose dependent rect. 23 14
91 76.94 temperature 15 90 > th dose dependent sin 5 NA
99 77.00 temperature 15 270 > th dose dependent rect. 6 20
102 77.05 temperature 30 10 < th dose dependent rect. 9 23
104 77.09 temperature 30 10 < th dose dependent rect. 3 23
107 77.12 temperature 30 10 < th dose dependent rect. 17 23
109 77.14 wind 9 14400 < th dose independent rect. 5 7
117 77.19 temperature 30 10 < th dose dependent rect. 21 23
127 77.28 temperature 30 90 < th dose dependent rect. 3 23
128 77.29 temperature 30 10 < th dose dependent sin 2 NA
145 77.47 temperature 15 10 > th dose dependent rect. 9 19
159 77.56 temperature 25 10 < th dose dependent sin 23 NA
172 77.64 temperature 30 270 < th dose dependent rect. 1 16
177 77.69 temperature 25 1440 < th dose dependent rect. 17 5
179 77.69 temperature 15 90 > th dose dependent rect. 7 23
192 77.77 wind 1 43200 > th dose dependent rect. 1 1
200 77.80 wind 3 43200 < th dose independent rect. 1 1
214 77.87 temperature 15 10 > th dose dependent rect. 7 23
215 77.88 temperature 15 10 > th dose dependent sin 3 NA
217 77.88 temperature 15 10 > th dose dependent rect. 9 15
240 77.97 temperature 25 1440 < th dose dependent rect. 20 1
245 78.00 temperature 15 10 > th dose dependent rect. 9 17
251 78.03 temperature 15 270 > th dose dependent rect. 7 17
260 78.08 temperature 15 10 > th dose dependent no NA NA
265 78.09 temperature 30 10 < th dose dependent rect. 4 14
282 78.14 temperature 30 90 < th dose dependent rect. 3 15
286 78.19 wind 9 14400 > th dose dependent rect. 9 4
297 78.24 temperature 25 1440 < th dose dependent sin 16 NA
303 78.27 temperature 25 720 < th dose dependent rect. 4 18
335 78.38 wind 9 14400 > th dose independent sin 6 NA
336 78.38 wind 9 14400 < th dose independent sin 6 NA
345 78.40 temperature 25 1440 < th dose dependent rect. 9 18
442 78.63 temperature 25 1440 < th dose dependent rect. 15 21
516 78.77 temperature 25 1440 < th dose dependent rect. 1 23
533 78.80 temperature 25 1440 < th dose dependent no NA NA
602 78.89 temperature 25 1440 < th dose dependent rect. 20 23
663 79.02 wind 9 14400 > th dose independent rect. 9 4
703 79.11 temperature 15 90 > th dose dependent rect. 20 23
714 79.14 temperature 20 10 > th dose dependent rect. 20 23
752 79.22 wind 9 43200 < th dose dependent rect. 1 1
754 79.23 wind 3 43200 > th dose independent rect. 23 3
787 79.29 temperature 15 10 > th dose dependent rect. 17 23
840 79.43 wind 9 14400 > th dose dependent sin 6 NA
856 79.45 temperature 25 720 < th dose dependent sin 0 NA