Os11g0696400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 3, N-terminal domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0696400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycoside hydrolase, family 3, N-terminal domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 302.23 | 0.817 | 3.19 | -1.45 | 0.0218 | -3.98 | -0.374 | 20.6 | -0.165 | 5.88 | 999.8 | 7 | -- | -- |
| 308.1 | 0.824 | 2.95 | -0.121 | 0.0167 | -0.33 | -0.368 | -- | -0.166 | 6.37 | 999.8 | 7 | -- | -- |
| 302.57 | 0.816 | 3.18 | -1.45 | 0.0241 | -3.96 | -- | 20.5 | -0.164 | 3.54 | 999.8 | 7 | -- | -- |
| 308.36 | 0.823 | 2.95 | -0.127 | 0.0396 | -0.333 | -- | -- | -0.165 | 1.95 | 999.8 | 7 | -- | -- |
| 302.6 | 0.815 | 3.19 | -1.45 | -- | -3.97 | -- | 20.5 | -0.163 | -- | 999.8 | 7 | -- | -- |
| 311 | 0.827 | 2.95 | -0.0644 | 0.017 | -- | -0.373 | -- | -0.187 | 6.18 | -- | -- | -- | -- |
| 311.31 | 0.826 | 2.95 | -0.0692 | 0.03 | -- | -- | -- | -0.186 | 2.25 | -- | -- | -- | -- |
| 308.45 | 0.822 | 2.95 | -0.125 | -- | -0.33 | -- | -- | -0.164 | -- | 999.8 | 7 | -- | -- |
| 308.77 | 0.823 | 2.95 | -- | 0.0367 | -0.312 | -- | -- | -0.153 | 1.88 | 999.7 | 4 | -- | -- |
| 311.36 | 0.825 | 2.95 | -0.0679 | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
| 311.43 | 0.826 | 2.95 | -- | 0.0287 | -- | -- | -- | -0.179 | 2.2 | -- | -- | -- | -- |
| 308.72 | 0.821 | 2.95 | -- | -- | -0.292 | -- | -- | -0.149 | -- | 1001 | 9 | -- | -- |
| 311.48 | 0.824 | 2.95 | -- | -- | -- | -- | -- | -0.178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 291.65 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 30 | 293.44 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 1 |
| 36 | 294.02 | wind | 1 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 41 | 294.60 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 63 | 295.00 | wind | 9 | 30 | > th | dose dependent | sin | 6 | NA |
| 77 | 295.56 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 24 | 3 |
| 78 | 295.57 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 24 | 1 |
| 159 | 296.85 | wind | 9 | 30 | < th | dose independent | sin | 6 | NA |
| 173 | 297.52 | wind | 1 | 720 | < th | dose independent | rect. | 13 | 1 |
| 180 | 297.70 | wind | 9 | 30 | > th | dose independent | sin | 5 | NA |
| 227 | 299.11 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 261 | 299.63 | humidity | 80 | 720 | < th | dose independent | rect. | 5 | 1 |
| 263 | 299.63 | humidity | 80 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 269 | 299.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 277 | 299.81 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 299 | 300.17 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 12 |
| 311 | 300.48 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 20 |
| 337 | 300.82 | humidity | 70 | 90 | > th | dose independent | rect. | 16 | 3 |
| 343 | 300.87 | humidity | 70 | 10 | > th | dose independent | rect. | 17 | 1 |
| 344 | 300.88 | humidity | 80 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 355 | 300.99 | humidity | 50 | 30 | > th | dose dependent | rect. | 17 | 2 |
| 373 | 301.21 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 3 |
| 375 | 301.22 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 11 |
| 385 | 301.32 | radiation | 1 | 10 | < th | dose independent | rect. | 5 | 14 |
| 430 | 301.52 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 20 |
| 442 | 301.59 | humidity | 80 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 457 | 301.65 | humidity | 80 | 720 | > th | dose independent | sin | 11 | NA |
| 487 | 301.69 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 493 | 301.72 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 20 |
| 510 | 301.78 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 15 |
| 567 | 301.96 | humidity | 80 | 720 | < th | dose independent | rect. | 15 | 17 |
| 586 | 301.97 | humidity | 80 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 603 | 302.06 | radiation | 1 | 30 | < th | dose independent | rect. | 16 | 3 |
| 604 | 302.06 | humidity | 70 | 720 | > th | dose dependent | sin | 12 | NA |
| 606 | 302.07 | radiation | 10 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 616 | 302.10 | humidity | 80 | 720 | > th | dose independent | rect. | 23 | 8 |
| 653 | 302.19 | radiation | 1 | 10 | < th | dose dependent | rect. | 5 | 14 |
| 660 | 302.24 | temperature | 30 | 10 | < th | dose independent | rect. | 17 | 2 |
| 661 | 302.24 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 6 | 21 |
| 662 | 302.24 | humidity | 90 | 720 | < th | dose dependent | rect. | 22 | 9 |
| 681 | 302.30 | humidity | 80 | 720 | < th | dose independent | sin | 11 | NA |
| 694 | 302.33 | radiation | 10 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 741 | 302.46 | humidity | 50 | 270 | > th | dose independent | rect. | 14 | 4 |
| 751 | 302.48 | wind | 1 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 831 | 302.62 | wind | 3 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 844 | 302.65 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 18 | 8 |
| 846 | 302.66 | wind | 3 | 270 | > th | dose independent | rect. | 5 | 1 |
| 862 | 302.69 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 14 |
| 865 | 302.70 | humidity | 70 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 872 | 302.71 | humidity | 80 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 879 | 302.73 | wind | 1 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 902 | 302.76 | humidity | 80 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 907 | 302.78 | wind | 5 | 90 | < th | dose independent | rect. | 16 | 3 |
| 957 | 302.86 | humidity | 50 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 962 | 302.88 | radiation | 30 | 270 | < th | dose independent | rect. | 13 | 5 |