Os11g0695800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0695800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 407.81 | 0.949 | 4.66 | 2.91 | 1.56 | -1.53 | 1.32 | -1.1 | 1.01 | 21.2 | 75.98 | 1208 | -- | -- |
| 407.91 | 0.941 | 4.65 | 3.03 | 1.72 | -1.66 | 1.2 | -- | 1.04 | 21.2 | 75.99 | 1116 | -- | -- |
| 412.83 | 0.946 | 4.66 | 2.94 | 1.66 | -1.62 | -- | -0.38 | 1.01 | 21.2 | 75.88 | 1142 | -- | -- |
| 412.97 | 0.946 | 4.65 | 2.99 | 1.71 | -1.63 | -- | -- | 1.04 | 21.2 | 76 | 1116 | -- | -- |
| 523.07 | 1.07 | 4.61 | 2.94 | -- | -1.53 | -- | -0.265 | 1.01 | -- | 76.01 | 1415 | -- | -- |
| 451.31 | 0.996 | 4.67 | 2.84 | 1.39 | -- | 1.16 | -- | 0.905 | 20.5 | -- | -- | -- | -- |
| 455.66 | 1 | 4.67 | 2.8 | 1.38 | -- | -- | -- | 0.905 | 20.6 | -- | -- | -- | -- |
| 523.62 | 1.07 | 4.61 | 2.93 | -- | -1.59 | -- | -- | 0.998 | -- | 76.36 | 1410 | -- | -- |
| 624.73 | 1.16 | 4.7 | -- | 1.34 | -1.52 | -- | -- | 0.78 | 20.8 | 87.5 | 1459 | -- | -- |
| 563.06 | 1.11 | 4.64 | 2.8 | -- | -- | -- | -- | 0.892 | -- | -- | -- | -- | -- |
| 662.92 | 1.2 | 4.74 | -- | 1.37 | -- | -- | -- | 0.593 | 20.7 | -- | -- | -- | -- |
| 727.21 | 1.26 | 4.67 | -- | -- | -1.61 | -- | -- | 0.767 | -- | 87 | 1469 | -- | -- |
| 769.76 | 1.3 | 4.71 | -- | -- | -- | -- | -- | 0.582 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 398.05 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 12 | 403.81 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 3 |
| 18 | 405.72 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 31 | 407.78 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 42 | 409.44 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 55 | 410.35 | humidity | 80.0 | 720 | > th | dose independent | rect. | 11 | 11 |
| 70 | 411.56 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 94 | 412.75 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 108 | 413.17 | humidity | 80.0 | 720 | < th | dose independent | rect. | 15 | 7 |
| 116 | 413.41 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 15 | 17 |
| 120 | 413.49 | humidity | 90.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 153 | 414.44 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 174 | 414.76 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 20 |
| 175 | 414.77 | humidity | 60.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 176 | 414.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 182 | 414.84 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 15 | 13 |
| 185 | 414.86 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 206 | 415.06 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 210 | 415.08 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 226 | 415.22 | humidity | 80.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 248 | 415.49 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 271 | 415.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 277 | 415.71 | humidity | 80.0 | 720 | > th | dose independent | sin | 17 | NA |
| 321 | 415.93 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 331 | 415.96 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 332 | 415.97 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 346 | 416.10 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 10 | 20 |
| 352 | 416.12 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 22 | 22 |
| 375 | 416.29 | humidity | 90.0 | 1440 | < th | dose dependent | no | NA | NA |
| 382 | 416.31 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 393 | 416.36 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 395 | 416.36 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 432 | 416.50 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 447 | 416.56 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 450 | 416.56 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 23 | 21 |
| 454 | 416.57 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 480 | 416.64 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 505 | 416.71 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 517 | 416.74 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 527 | 416.75 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 1 | 19 |
| 568 | 416.85 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 7 |
| 571 | 416.85 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 591 | 416.91 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 11 |
| 605 | 416.94 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 22 |
| 610 | 416.95 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 619 | 416.96 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 625 | 416.98 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 632 | 416.99 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 674 | 417.07 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 677 | 417.08 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 739 | 417.19 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 748 | 417.22 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 19 | 7 |
| 761 | 417.27 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 763 | 417.28 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 805 | 417.36 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 833 | 417.40 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 14 |
| 863 | 417.44 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 864 | 417.44 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 871 | 417.45 | humidity | 80.0 | 720 | < th | dose independent | sin | 17 | NA |
| 886 | 417.48 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 906 | 417.51 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 923 | 417.55 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 926 | 417.55 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 5 |
| 959 | 417.62 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 979 | 417.65 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 983 | 417.65 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |