Os11g0694800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0694800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.77 | 0.234 | 9.28 | -0.321 | 0.209 | 0.402 | 0.337 | 1.21 | 0.281 | 6.89 | -0.03216 | 5008 | -- | -- |
| 25.79 | 0.237 | 9.3 | -0.291 | 0.217 | 0.596 | 0.293 | -- | 0.296 | 6.89 | 0.2492 | 5740 | -- | -- |
| 25 | 0.233 | 9.28 | -0.315 | 0.208 | 0.436 | -- | 1.16 | 0.283 | 6.75 | -0.01314 | 5270 | -- | -- |
| 26.05 | 0.238 | 9.3 | -0.288 | 0.214 | 0.606 | -- | -- | 0.299 | 6.63 | 0.2488 | 5740 | -- | -- |
| 27.22 | 0.243 | 9.28 | -0.311 | -- | 0.436 | -- | 1.18 | 0.287 | -- | -0.01745 | 5283 | -- | -- |
| 33.32 | 0.271 | 9.31 | -0.13 | 0.212 | -- | 0.392 | -- | 0.228 | 6.58 | -- | -- | -- | -- |
| 33.71 | 0.272 | 9.31 | -0.124 | 0.213 | -- | -- | -- | 0.227 | 6.62 | -- | -- | -- | -- |
| 28.39 | 0.248 | 9.3 | -0.296 | -- | 0.618 | -- | -- | 0.304 | -- | 0.2368 | 5358 | -- | -- |
| 27.98 | 0.246 | 9.29 | -- | 0.212 | 0.51 | -- | -- | 0.321 | 6.67 | 0.1346 | 5887 | -- | -- |
| 36.07 | 0.281 | 9.32 | -0.119 | -- | -- | -- | -- | 0.231 | -- | -- | -- | -- | -- |
| 34.12 | 0.273 | 9.31 | -- | 0.212 | -- | -- | -- | 0.241 | 6.66 | -- | -- | -- | -- |
| 30.3 | 0.256 | 9.3 | -- | -- | 0.519 | -- | -- | 0.324 | -- | 0.09449 | 5682 | -- | -- |
| 36.45 | 0.282 | 9.31 | -- | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 24.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 24.19 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 5 | 24.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 7 | 24.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 8 | 24.49 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 9 | 24.51 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 19 |
| 13 | 24.53 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 18 |
| 17 | 24.53 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 18 |
| 28 | 24.57 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 33 | 24.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 73 | 24.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 75 | 24.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 83 | 24.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 91 | 24.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 15 |
| 121 | 24.71 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 17 | NA |
| 122 | 24.71 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 17 | NA |
| 123 | 24.71 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 124 | 24.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 125 | 24.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 134 | 24.71 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 17 | NA |
| 135 | 24.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 13 |
| 136 | 24.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 170 | 24.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 174 | 24.73 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 183 | 24.73 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 205 | 24.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 224 | 24.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 344 | 24.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 345 | 24.84 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 346 | 24.84 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 348 | 24.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 359 | 24.84 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 13 | NA |
| 361 | 24.84 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 371 | 24.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 372 | 24.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 383 | 24.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 419 | 24.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 424 | 24.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 10 |
| 431 | 24.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 432 | 24.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 434 | 24.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 488 | 24.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 500 | 24.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 22 |
| 507 | 24.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 516 | 24.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 554 | 24.94 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 574 | 24.95 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 595 | 24.96 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 596 | 24.96 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 616 | 24.96 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 617 | 24.96 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 624 | 24.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 721 | 25.01 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 739 | 25.02 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 803 | 25.06 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 816 | 25.06 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 840 | 25.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 842 | 25.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 852 | 25.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 854 | 25.08 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 855 | 25.08 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 918 | 25.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 925 | 25.13 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 938 | 25.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 998 | 25.16 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 5 |