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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0694500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.86 (0.0244) R2 : 0.00223
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0518 (0.0513) R2dN8 : 0.00288 R2N8 : 0.00223
σ : 0.459
deviance : 96.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.84 0.455 2.89 -0.281 0.0166 0.491 -0.591 -3.48 0.00785 5.44 27.79 12 -- --
95.37 0.458 2.86 -0.0436 0.0502 0.199 -0.419 -- 0.0484 7.26 27.79 12 -- --
94.15 0.455 2.88 -0.274 0.0643 0.557 -- -4.09 0.0143 10.9 28.4 9 -- --
95.57 0.458 2.86 -0.046 0.0801 0.154 -- -- 0.0501 11.2 27.6 12 -- --
94.39 0.455 2.89 -0.29 -- 0.609 -- -4.29 0.0124 -- 28.4 9 -- --
95.93 0.459 2.86 -0.0285 0.0113 -- 0.513 -- 0.0464 17.9 -- -- -- --
95.87 0.459 2.86 -0.0292 0.107 -- -- -- 0.0498 12.4 -- -- -- --
95.93 0.458 2.86 -0.0538 -- 0.186 -- -- 0.0466 -- 26.84 12 -- --
95.62 0.458 2.85 -- 0.0817 0.149 -- -- 0.055 11.3 27.6 9 -- --
96.59 0.459 2.86 -0.0328 -- -- -- -- 0.0481 -- -- -- -- --
95.9 0.458 2.85 -- 0.107 -- -- -- 0.0531 12.4 -- -- -- --
95.99 0.458 2.86 -- -- 0.192 -- -- 0.0541 -- 27.3 10 -- --
96.62 0.459 2.86 -- -- -- -- -- 0.0518 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.78 humidity 70.0 10 < th dose dependent rect. 10 1
4 89.44 radiation 20.0 30 > th dose dependent rect. 10 1
5 89.50 radiation 40.0 30 > th dose dependent rect. 10 1
7 89.53 humidity 70.0 10 < th dose independent rect. 10 1
11 89.62 radiation 30.0 30 > th dose independent rect. 10 1
15 89.83 wind 3.0 30 < th dose independent rect. 10 1
18 89.88 atmosphere 1005.0 30 > th dose independent rect. 10 1
19 89.91 atmosphere 1010.0 30 < th dose independent rect. 10 1
21 89.92 atmosphere 995.0 30 > th dose dependent rect. 10 1
23 89.93 temperature 20.0 30 > th dose independent rect. 10 1
26 89.95 wind 1.0 30 > th dose independent rect. 10 1
28 89.95 temperature 10.0 30 > th dose independent rect. 10 1
30 89.95 humidity 50.0 30 > th dose independent rect. 10 1
33 89.95 atmosphere 995.0 30 > th dose independent rect. 10 1
36 89.95 precipitation 0.1 30 < th dose independent rect. 10 1
37 89.95 temperature 10.0 30 > th dose independent rect. 11 23
38 89.95 wind 7.0 30 < th dose dependent rect. 10 1
41 89.95 precipitation 0.1 30 < th dose dependent rect. 10 1
43 89.97 temperature 30.0 30 < th dose independent rect. 10 1
45 89.99 temperature 10.0 30 > th dose dependent rect. 10 1
50 90.15 wind 1.0 90 > th dose dependent rect. 4 1
58 90.19 temperature 10.0 1440 > th dose independent rect. 11 1
62 90.19 atmosphere 995.0 1440 > th dose independent rect. 11 1
65 90.19 precipitation 0.1 1440 < th dose independent rect. 11 1
66 90.19 temperature 10.0 1440 > th dose independent rect. 12 23
69 90.19 wind 1.0 30 < th dose dependent rect. 10 1
70 90.19 atmosphere 1015.0 30 < th dose dependent rect. 10 1
71 90.19 precipitation 0.1 1440 < th dose dependent rect. 11 1
85 90.39 wind 1.0 30 > th dose dependent rect. 10 1
87 90.42 radiation 40.0 30 < th dose independent rect. 10 1
90 90.46 precipitation 0.1 10 > th dose independent rect. 5 3
130 90.46 precipitation 0.1 90 > th dose dependent rect. 4 3
131 90.46 precipitation 0.1 10 > th dose dependent rect. 5 3
163 90.47 precipitation 0.1 90 > th dose independent rect. 4 1
172 90.47 wind 3.0 10 > th dose dependent rect. 6 1
173 90.47 precipitation 0.1 90 > th dose dependent rect. 4 1
191 90.48 wind 3.0 90 > th dose independent rect. 4 1
193 90.50 wind 3.0 10 > th dose independent rect. 6 1
204 90.50 wind 5.0 90 > th dose independent rect. 4 3
219 90.63 humidity 50.0 30 > th dose dependent rect. 10 1
223 90.72 radiation 40.0 30 < th dose dependent rect. 10 1
262 90.97 radiation 40.0 30 > th dose dependent rect. 12 23
271 91.03 radiation 40.0 30 > th dose independent rect. 12 23
280 91.29 temperature 30.0 10 < th dose independent rect. 11 23
289 91.45 radiation 1.0 10 < th dose independent rect. 6 1
310 91.71 wind 9.0 30 < th dose independent rect. 11 23
332 92.01 temperature 10.0 1440 > th dose independent rect. 13 1
336 92.01 atmosphere 995.0 1440 > th dose independent rect. 13 1
339 92.01 temperature 10.0 1440 > th dose independent rect. 14 23
345 92.03 atmosphere 995.0 30 > th dose independent rect. 11 23
346 92.04 precipitation 0.1 30 < th dose independent rect. 11 23
347 92.04 precipitation 0.1 30 < th dose dependent rect. 11 23
348 92.05 wind 1.0 30 < th dose independent rect. 9 5
351 92.05 temperature 25.0 270 > th dose dependent rect. 10 1
355 92.07 temperature 25.0 30 > th dose dependent rect. 12 1
368 92.22 temperature 25.0 30 > th dose independent rect. 12 1
371 92.23 temperature 25.0 30 > th dose independent rect. 4 1
385 92.30 temperature 25.0 90 > th dose dependent rect. 4 1
399 92.37 atmosphere 1010.0 30 < th dose independent rect. 12 1
401 92.39 humidity 60.0 30 > th dose independent rect. 12 1
403 92.40 humidity 90.0 10 < th dose independent rect. 4 1
405 92.40 wind 1.0 1440 < th dose dependent rect. 17 1
414 92.44 wind 1.0 1440 < th dose independent rect. 17 1
415 92.45 wind 1.0 10 < th dose dependent rect. 9 6
438 92.49 wind 3.0 30 > th dose independent rect. 12 1
439 92.49 temperature 25.0 270 > th dose independent rect. 10 1
443 92.50 humidity 50.0 30 > th dose dependent rect. 12 1
444 92.50 wind 1.0 270 < th dose dependent rect. 10 11
448 92.54 wind 7.0 30 < th dose independent rect. 12 1
453 92.56 humidity 90.0 30 < th dose independent rect. 12 1
460 92.60 temperature 10.0 30 > th dose independent rect. 12 1
462 92.60 atmosphere 995.0 30 > th dose independent rect. 12 1
464 92.60 radiation 1.0 30 > th dose independent rect. 12 1
465 92.60 precipitation 0.1 30 < th dose independent rect. 12 1
466 92.60 temperature 10.0 30 > th dose independent rect. 13 23
468 92.60 precipitation 0.1 30 < th dose dependent rect. 12 1
472 92.61 atmosphere 1015.0 30 < th dose dependent rect. 12 1
475 92.62 radiation 40.0 30 > th dose independent rect. 12 1
477 92.63 temperature 30.0 10 < th dose independent rect. 5 23
479 92.63 radiation 1.0 30 > th dose dependent rect. 12 1
482 92.65 precipitation 0.1 10 < th dose independent sin 0 NA
484 92.65 precipitation 0.1 10 < th dose dependent sin 0 NA
485 92.65 wind 1.0 270 < th dose dependent rect. 10 4
486 92.66 precipitation 0.1 10 > th dose independent sin 0 NA
487 92.66 precipitation 0.1 10 > th dose dependent sin 0 NA
488 92.66 wind 1.0 30 > th dose dependent rect. 12 1
503 92.70 radiation 40.0 30 > th dose dependent sin 12 NA
505 92.70 humidity 70.0 30 < th dose dependent rect. 17 18
506 92.71 humidity 70.0 30 < th dose independent rect. 17 18
507 92.71 wind 9.0 30 < th dose dependent rect. 12 1
508 92.71 atmosphere 995.0 30 > th dose dependent rect. 12 1
515 92.72 wind 1.0 270 < th dose dependent rect. 10 6
519 92.73 wind 1.0 270 < th dose dependent rect. 10 8
520 92.74 wind 1.0 1440 > th dose independent rect. 17 1
536 92.76 radiation 1.0 10 < th dose independent rect. 4 2
538 92.76 temperature 25.0 10 > th dose dependent rect. 10 3
548 92.78 temperature 25.0 270 > th dose dependent rect. 24 11
555 92.80 radiation 40.0 30 > th dose independent sin 12 NA
559 92.80 humidity 70.0 30 < th dose dependent rect. 19 16
560 92.81 wind 1.0 270 < th dose independent rect. 10 10
574 92.82 atmosphere 1005.0 30 > th dose dependent rect. 4 1
584 92.83 wind 1.0 270 < th dose independent rect. 9 5
611 92.87 wind 1.0 10 > th dose independent sin 21 NA
678 92.93 wind 1.0 10 < th dose independent sin 21 NA
684 92.94 temperature 30.0 30 < th dose independent rect. 12 1
689 92.95 temperature 25.0 90 > th dose independent rect. 9 5
702 92.96 radiation 1.0 30 > th dose independent rect. 11 23
709 92.97 humidity 70.0 10 < th dose independent rect. 12 23
726 93.00 precipitation 0.1 1440 > th dose independent rect. 12 1
729 93.00 precipitation 0.1 1440 > th dose dependent rect. 12 1
782 93.08 humidity 90.0 30 < th dose dependent rect. 12 1
806 93.12 wind 7.0 270 > th dose dependent rect. 2 6
810 93.13 temperature 25.0 270 > th dose independent rect. 1 10
831 93.14 atmosphere 1005.0 90 > th dose independent rect. 4 1
837 93.14 wind 1.0 10 < th dose dependent sin 21 NA
854 93.16 radiation 40.0 14400 < th dose dependent rect. 23 1
922 93.26 atmosphere 1005.0 10 > th dose independent rect. 10 4
970 93.28 wind 1.0 270 < th dose independent rect. 13 1
972 93.28 radiation 20.0 10 < th dose independent rect. 6 22
974 93.28 wind 1.0 270 < th dose dependent rect. 13 1
979 93.29 radiation 40.0 30 < th dose independent rect. 6 22