Os11g0691700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0691700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.05 | 0.484 | 5.76 | 2.98 | 0.162 | -0.622 | 0.351 | 2.07 | 0.933 | 14.3 | 25.82 | 926 | -- | -- |
| 111.2 | 0.491 | 5.83 | 2.44 | 0.16 | -0.458 | 0.0437 | -- | 0.73 | 14.4 | 27.5 | 1086 | -- | -- |
| 106.47 | 0.481 | 5.77 | 2.94 | 0.167 | -0.603 | -- | 1.9 | 0.92 | 14 | 25.9 | 926 | -- | -- |
| 110.48 | 0.49 | 5.83 | 2.46 | 0.208 | -0.459 | -- | -- | 0.74 | 12.5 | 27.57 | 1087 | -- | -- |
| 107.82 | 0.484 | 5.76 | 3 | -- | -0.669 | -- | 2.04 | 0.946 | -- | 25.7 | 925 | -- | -- |
| 116.1 | 0.505 | 5.85 | 2.3 | 0.326 | -- | -0.0684 | -- | 0.613 | 11.9 | -- | -- | -- | -- |
| 116.11 | 0.505 | 5.85 | 2.3 | 0.326 | -- | -- | -- | 0.613 | 11.9 | -- | -- | -- | -- |
| 112.24 | 0.493 | 5.82 | 2.49 | -- | -0.57 | -- | -- | 0.854 | -- | 25.47 | 900 | -- | -- |
| 252.07 | 0.739 | 5.92 | -- | 0.23 | 0.235 | -- | -- | 0.334 | 9.86 | 28 | 30 | -- | -- |
| 122.82 | 0.518 | 5.86 | 2.29 | -- | -- | -- | -- | 0.609 | -- | -- | -- | -- | -- |
| 255.47 | 0.748 | 5.91 | -- | 0.299 | -- | -- | -- | 0.357 | 11.5 | -- | -- | -- | -- |
| 255.26 | 0.744 | 5.92 | -- | -- | 0.271 | -- | -- | 0.337 | -- | 27.93 | 29 | -- | -- |
| 261.09 | 0.754 | 5.92 | -- | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.61 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 2 | 100.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 3 | 100.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 6 | 100.45 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 7 | 100.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 20 | 101.22 | temperature | 15 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 23 | 101.29 | temperature | 15 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 35 | 101.49 | temperature | 15 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 45 | 101.61 | temperature | 15 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 51 | 101.64 | temperature | 15 | 14400 | < th | dose dependent | sin | 2 | NA |
| 69 | 101.77 | temperature | 15 | 14400 | < th | dose dependent | rect. | 3 | 21 |
| 71 | 101.78 | radiation | 40 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 78 | 101.81 | temperature | 15 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 132 | 102.04 | temperature | 15 | 14400 | < th | dose dependent | rect. | 7 | 19 |
| 138 | 102.06 | temperature | 15 | 14400 | < th | dose dependent | no | NA | NA |
| 142 | 102.07 | temperature | 15 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 145 | 102.08 | temperature | 15 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 185 | 102.15 | temperature | 15 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 195 | 102.17 | temperature | 15 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 215 | 102.21 | temperature | 15 | 14400 | < th | dose dependent | sin | 17 | NA |
| 258 | 102.29 | temperature | 15 | 14400 | < th | dose dependent | rect. | 16 | 9 |
| 311 | 102.40 | temperature | 15 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 332 | 102.44 | temperature | 15 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 357 | 102.51 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 363 | 102.52 | temperature | 15 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 422 | 102.71 | temperature | 15 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 429 | 102.73 | radiation | 10 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 449 | 102.83 | temperature | 15 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 481 | 103.02 | humidity | 50 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 504 | 103.14 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 507 | 103.15 | radiation | 40 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 524 | 103.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 525 | 103.27 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 597 | 103.70 | radiation | 10 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 635 | 104.17 | radiation | 1 | 720 | < th | dose independent | rect. | 16 | 8 |
| 640 | 104.20 | temperature | 15 | 14400 | < th | dose independent | rect. | 9 | 16 |
| 644 | 104.22 | temperature | 15 | 14400 | < th | dose independent | rect. | 9 | 14 |
| 649 | 104.24 | humidity | 80 | 90 | < th | dose dependent | rect. | 20 | 12 |
| 662 | 104.31 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 663 | 104.32 | temperature | 15 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 677 | 104.40 | humidity | 50 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 719 | 104.67 | temperature | 15 | 14400 | < th | dose independent | sin | 23 | NA |
| 732 | 104.73 | radiation | 30 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 736 | 104.78 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 13 |
| 755 | 104.91 | radiation | 1 | 720 | < th | dose independent | rect. | 11 | 13 |
| 767 | 104.98 | radiation | 1 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 786 | 105.07 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 799 | 105.13 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 805 | 105.15 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 830 | 105.28 | radiation | 30 | 90 | > th | dose independent | rect. | 7 | 1 |
| 848 | 105.28 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 13 |
| 855 | 105.32 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 860 | 105.33 | radiation | 1 | 720 | > th | dose independent | rect. | 16 | 3 |
| 876 | 105.37 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 878 | 105.38 | radiation | 30 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 898 | 105.40 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 901 | 105.41 | humidity | 80 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 902 | 105.42 | radiation | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 912 | 105.42 | radiation | 1 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 922 | 105.43 | wind | 7 | 720 | < th | dose independent | rect. | 15 | 4 |
| 931 | 105.47 | humidity | 80 | 90 | < th | dose independent | rect. | 3 | 4 |
| 959 | 105.49 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 1 |