Os11g0691600 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0691600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	5.88	(0.0476)	R²	:	0.755
β₁	:	3.19	(0.174)	R²_dD	:	0.191	R²_D	:	0.146
β₂	:	1.04	(0.127)	R²_dC	:	0.0417	R²_C	:	-0.0792
β₃	:	3.31	(0.102)	R²_dE	:	0.641	R²_E	:	0.512
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.681	(0.101)	R²_dN8	:	0.0335	R²_N8	:	0.00339
σ	:	0.888
deviance	:	363.68
__

_____

C
peak time of C	:	8.72
E
wheather	:	radiation
threshold	:	10.01
memory length	:	235
response mode	:	< th
dose dependency	:	dose independent
G
type of G	:	rect.
peak or start time of G	:	11
open length of G	:	19.9

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
357.19	0.888	5.88	3.18	1.03	3.35	1.64	0.422	0.698	9.01	10	237	11	20
357.67	0.881	5.88	3.15	1.03	3.32	1.43	--	0.692	8.76	10.04	235	11	20
363.13	0.888	5.87	3.21	1.01	3.2	--	-0.298	0.681	8.11	10.04	233	11	20
363.68	0.888	5.88	3.19	1.04	3.31	--	--	0.681	8.72	10.01	235	11	19.9
398.42	0.93	5.88	3.17	--	3.24	--	-0.0702	0.794	--	10.03	284	10.9	20.9
515	1.06	5.92	3.02	3.44	--	0.0175	--	0.654	2.65	--	--	--	--
515	1.06	5.92	3.02	3.44	--	--	--	0.653	2.65	--	--	--	--
398.19	0.929	5.88	3.25	--	3.23	--	--	0.784	--	10.04	286	10.9	20.9
582.15	1.12	5.99	--	1.12	3.63	--	--	0.273	10	9.31	227	10.9	20.8
1206.63	1.62	5.9	3.16	--	--	--	--	0.74	--	--	--	--	--
754.96	1.29	5.99	--	3.5	--	--	--	0.317	2.66	--	--	--	--
619.8	1.16	5.94	--	--	3.32	--	--	0.545	--	9.96	285	11.2	21.1
1470.69	1.79	5.98	--	--	--	--	--	0.389	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	367.55	radiation	20	270	< th	dose dependent	rect.	11	20
2	368.20	radiation	10	270	< th	dose independent	rect.	11	20
7	371.30	humidity	70	90	> th	dose dependent	rect.	3	18
9	373.97	humidity	80	90	> th	dose independent	rect.	3	17
25	379.56	humidity	70	10	> th	dose dependent	rect.	4	18
41	382.19	radiation	20	270	< th	dose dependent	rect.	2	17
42	383.15	humidity	70	30	> th	dose dependent	sin	0	NA
44	383.18	humidity	70	270	> th	dose dependent	rect.	1	19
99	387.92	humidity	80	30	< th	dose independent	rect.	22	20
106	388.22	radiation	10	270	< th	dose dependent	rect.	22	23
109	388.37	radiation	10	270	< th	dose independent	rect.	2	17
111	388.62	humidity	50	90	> th	dose dependent	rect.	17	16
137	390.16	humidity	70	90	> th	dose dependent	rect.	23	23
147	390.62	humidity	80	90	> th	dose independent	sin	1	NA
157	391.00	radiation	10	270	< th	dose dependent	sin	1	NA
163	391.24	radiation	10	90	< th	dose dependent	sin	23	NA
173	391.61	humidity	60	90	> th	dose dependent	rect.	13	20
262	395.38	humidity	70	90	> th	dose dependent	rect.	11	22
339	397.43	radiation	1	270	> th	dose independent	sin	1	NA
390	398.87	humidity	80	90	< th	dose independent	sin	1	NA
400	399.12	radiation	20	270	< th	dose dependent	rect.	11	8
408	399.37	humidity	60	90	> th	dose dependent	rect.	15	18
431	399.99	radiation	10	270	< th	dose independent	rect.	23	22
476	401.11	radiation	20	90	< th	dose dependent	no	NA	NA
523	402.09	humidity	50	10	> th	dose dependent	rect.	18	15
524	402.11	humidity	70	90	> th	dose dependent	rect.	17	23
526	402.16	radiation	10	90	> th	dose independent	rect.	8	23
531	402.29	humidity	70	90	> th	dose dependent	no	NA	NA
571	403.25	radiation	1	270	< th	dose independent	sin	1	NA
630	404.58	radiation	10	90	> th	dose independent	sin	23	NA
655	405.09	radiation	20	90	< th	dose dependent	rect.	17	23
666	405.33	humidity	70	90	> th	dose dependent	rect.	15	23
667	405.34	radiation	1	90	> th	dose independent	rect.	7	11
686	405.81	radiation	10	270	< th	dose independent	rect.	11	8
762	407.07	radiation	10	90	> th	dose independent	no	NA	NA
883	407.60	humidity	80	30	< th	dose independent	rect.	9	9
903	407.84	radiation	20	90	< th	dose dependent	rect.	3	23