Os11g0691500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EGF domain containing protein.
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Os11g0691500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EGF domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 427.71 | 0.972 | 11 | 6.55 | 1.62 | 4.42 | 0.188 | -5.69 | 1.25 | 19.8 | 25.15 | 7081 | 7.82 | 4.42 |
| 498.79 | 1.04 | 11 | 7.6 | 1.83 | 4.78 | 0.85 | -- | 1.23 | 19.9 | 25.04 | 8515 | 8.08 | 4.32 |
| 427.76 | 0.963 | 11 | 6.54 | 1.61 | 4.42 | -- | -5.67 | 1.26 | 19.8 | 25.16 | 7071 | 7.83 | 4.43 |
| 478.92 | 1.02 | 10.9 | 7.98 | 1.55 | 4.88 | -- | -- | 1.46 | 19.7 | 25.02 | 8440 | 7.82 | 4.98 |
| 508.06 | 1.05 | 11 | 6.49 | -- | 4.88 | -- | -5.59 | 1.23 | -- | 25.46 | 8132 | 8.27 | 4.91 |
| 1220.05 | 1.64 | 10.3 | 11.4 | 1.77 | -- | 0.311 | -- | 3.56 | 20.3 | -- | -- | -- | -- |
| 1220.34 | 1.64 | 10.3 | 11.4 | 1.77 | -- | -- | -- | 3.56 | 20.2 | -- | -- | -- | -- |
| 545.05 | 1.09 | 10.8 | 8.02 | -- | 5.36 | -- | -- | 1.62 | -- | 25.1 | 6684 | 7.85 | 5.37 |
| 460.32 | 0.999 | 11.2 | -- | 1.72 | 9.05 | -- | -- | -0.353 | 19.9 | 20.59 | 47520 | 7.48 | 0.00705 |
| 1393.38 | 1.74 | 10.3 | 11.4 | -- | -- | -- | -- | 3.54 | -- | -- | -- | -- | -- |
| 4664.27 | 3.19 | 10.6 | -- | 1.72 | -- | -- | -- | 2.28 | 20.7 | -- | -- | -- | -- |
| 622.33 | 1.16 | 11.2 | -- | -- | 9.04 | -- | -- | -0.357 | -- | 20.6 | 47520 | 7.47 | 0.0167 |
| 4832.53 | 3.24 | 10.6 | -- | -- | -- | -- | -- | 2.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 350.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 2 | 355.81 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 6 | 371.38 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 16 | 389.70 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 23 | 391.71 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 24 | 392.51 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 25 | 392.71 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 35 | 398.60 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 70 | 406.57 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 90 | 410.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 105 | 411.94 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 117 | 412.92 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 118 | 412.94 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 124 | 413.03 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 128 | 413.40 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 162 | 418.59 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 167 | 419.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 183 | 421.62 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 188 | 422.16 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 189 | 422.35 | temperature | 20 | 14400 | < th | dose dependent | sin | 12 | NA |
| 191 | 422.59 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 206 | 423.98 | radiation | 10 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 208 | 424.03 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 223 | 424.25 | radiation | 10 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 224 | 424.27 | radiation | 10 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 251 | 425.46 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 295 | 428.01 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 327 | 430.68 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 353 | 432.17 | radiation | 40 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 362 | 432.49 | radiation | 40 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 377 | 432.82 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 463 | 436.31 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 575 | 440.18 | temperature | 20 | 14400 | < th | dose independent | sin | 9 | NA |
| 621 | 441.83 | temperature | 20 | 14400 | > th | dose independent | sin | 9 | NA |
| 648 | 442.79 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 669 | 443.75 | humidity | 90 | 43200 | > th | dose dependent | sin | 12 | NA |
| 693 | 444.82 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 705 | 445.47 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 799 | 448.51 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 800 | 448.55 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 959 | 453.95 | temperature | 20 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 969 | 454.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 980 | 454.75 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 4 |