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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0689300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Calmodulin-binding protein MPCBP.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0263) R2 : 0.0073
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.101 (0.0553) R2dN8 : 0.00943 R2N8 : 0.0073
σ : 0.495
deviance : 112.33
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.05 0.484 2.99 -0.311 0.0842 -0.389 -0.336 1.23 0.0672 7.84 1.2 20 -- --
107.3 0.482 2.98 -0.256 0.0938 -0.286 -0.304 -- 0.0823 7.65 1.2 16 -- --
106.3 0.48 2.99 -0.318 0.0929 -0.374 -- 1.24 0.0713 6.38 1.2 19 -- --
107.53 0.483 2.98 -0.258 0.113 -0.262 -- -- 0.0771 6.32 1.1 16 -- --
106.75 0.481 3 -0.325 -- -0.417 -- 1.28 0.0686 -- 1.193 19 -- --
109.1 0.49 2.98 -0.22 0.191 -- -0.233 -- 0.0719 5.79 -- -- -- --
109.22 0.489 2.98 -0.222 0.19 -- -- -- 0.0726 5.43 -- -- -- --
108.12 0.484 2.98 -0.262 -- -0.313 -- -- 0.0802 -- 1.16 16 -- --
109.24 0.487 2.97 -- 0.126 -0.225 -- -- 0.106 6.14 1.178 16 -- --
111.1 0.493 2.98 -0.216 -- -- -- -- 0.0773 -- -- -- -- --
110.52 0.492 2.97 -- 0.187 -- -- -- 0.0974 5.47 -- -- -- --
109.89 0.488 2.98 -- -- -0.281 -- -- 0.108 -- 1.102 16 -- --
112.33 0.495 2.98 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 102.41 atmosphere 1005.0 30 > th dose dependent rect. 22 1
2 102.42 atmosphere 1005.0 30 > th dose independent rect. 22 1
3 102.42 wind 5.0 30 < th dose dependent rect. 22 1
5 102.46 wind 3.0 30 < th dose independent rect. 22 1
6 102.47 humidity 80.0 30 > th dose independent rect. 22 1
9 102.48 radiation 40.0 4320 < th dose dependent rect. 23 1
10 102.49 wind 9.0 1440 < th dose independent rect. 23 1
11 102.49 temperature 10.0 1440 > th dose independent rect. 23 1
14 102.49 temperature 30.0 1440 < th dose independent rect. 23 1
18 102.49 humidity 50.0 1440 > th dose independent rect. 23 1
28 102.49 atmosphere 995.0 1440 > th dose independent rect. 23 1
29 102.49 radiation 1.0 1440 < th dose independent rect. 23 1
49 102.49 temperature 10.0 1440 > th dose independent rect. 24 23
53 102.49 radiation 1.0 1440 < th dose dependent rect. 23 1
60 102.52 precipitation 0.1 30 < th dose independent rect. 22 1
61 102.52 precipitation 0.1 30 < th dose dependent rect. 22 1
62 102.53 wind 1.0 30 > th dose independent rect. 22 1
64 102.54 temperature 20.0 30 > th dose independent rect. 22 1
68 102.55 temperature 10.0 30 > th dose independent rect. 22 1
70 102.55 temperature 30.0 30 < th dose independent rect. 22 1
71 102.55 humidity 50.0 30 > th dose independent rect. 22 1
75 102.55 atmosphere 1010.0 30 < th dose independent rect. 22 1
77 102.55 radiation 1.0 30 < th dose independent rect. 22 1
82 102.55 temperature 10.0 30 > th dose independent rect. 23 23
83 102.55 radiation 1.0 30 < th dose dependent rect. 22 1
89 102.56 temperature 10.0 30 > th dose dependent rect. 22 1
90 102.56 humidity 50.0 30 > th dose dependent rect. 22 1
98 102.63 humidity 90.0 30 < th dose independent rect. 22 1
99 102.69 temperature 30.0 30 < th dose dependent rect. 22 1
104 102.82 atmosphere 1015.0 30 < th dose dependent rect. 22 1
105 102.84 humidity 90.0 30 < th dose dependent rect. 22 1
106 102.91 wind 9.0 30 < th dose independent rect. 23 23
107 102.93 wind 1.0 30 > th dose dependent rect. 22 1
125 103.25 radiation 1.0 90 < th dose dependent rect. 7 3
154 103.49 radiation 1.0 90 < th dose independent rect. 8 3
165 103.96 temperature 10.0 720 > th dose independent rect. 3 8
166 103.96 atmosphere 995.0 720 > th dose independent rect. 3 8
167 103.96 temperature 10.0 720 > th dose independent rect. 11 16
170 104.01 wind 1.0 30 > th dose independent rect. 23 23
177 104.05 temperature 10.0 720 > th dose independent rect. 15 8
178 104.05 temperature 10.0 720 > th dose independent rect. 23 16
179 104.06 wind 9.0 720 < th dose independent rect. 3 8
184 104.29 wind 1.0 30 > th dose independent sin 16 NA
187 104.37 humidity 50.0 720 > th dose independent rect. 3 8
189 104.39 wind 9.0 30 < th dose independent rect. 3 23
191 104.51 atmosphere 1015.0 720 < th dose independent rect. 3 8
192 104.51 temperature 15.0 30 > th dose independent rect. 3 23
193 104.51 temperature 30.0 10 < th dose dependent rect. 2 1
196 104.55 wind 3.0 10 < th dose independent rect. 2 1
200 104.57 atmosphere 1005.0 10 > th dose independent rect. 2 1
201 104.58 temperature 25.0 30 < th dose independent rect. 2 1
203 104.58 wind 3.0 10 < th dose dependent rect. 2 1
208 104.58 atmosphere 995.0 10 > th dose dependent rect. 2 1
212 104.59 humidity 80.0 30 > th dose independent rect. 2 1
219 104.60 temperature 10.0 30 > th dose independent rect. 2 1
223 104.60 humidity 50.0 30 > th dose independent rect. 2 1
228 104.60 atmosphere 1010.0 30 < th dose independent rect. 2 1
230 104.60 radiation 1.0 30 < th dose independent rect. 2 1
235 104.60 precipitation 0.1 30 < th dose independent rect. 2 1
236 104.60 wind 1.0 30 < th dose independent rect. 13 14
240 104.60 humidity 50.0 30 > th dose dependent rect. 2 1
246 104.60 radiation 1.0 30 < th dose dependent rect. 2 1
251 104.60 precipitation 0.1 30 < th dose dependent rect. 2 1
259 104.63 radiation 40.0 720 < th dose independent rect. 15 8
260 104.63 temperature 10.0 30 > th dose dependent rect. 2 1
261 104.63 atmosphere 1015.0 30 < th dose dependent rect. 2 1
296 104.69 wind 1.0 30 > th dose independent rect. 2 1
314 104.89 wind 1.0 30 < th dose independent rect. 23 4
317 104.95 radiation 1.0 90 < th dose independent rect. 7 5
327 105.02 precipitation 0.1 720 < th dose independent rect. 15 8
331 105.02 precipitation 0.1 720 < th dose dependent rect. 15 8
340 105.08 atmosphere 995.0 720 > th dose independent rect. 23 16
343 105.10 precipitation 0.1 720 < th dose independent rect. 11 16
344 105.10 precipitation 0.1 720 < th dose dependent rect. 11 16
350 105.22 precipitation 0.1 30 < th dose independent rect. 3 23
351 105.22 precipitation 0.1 30 < th dose dependent rect. 3 23
361 105.33 atmosphere 995.0 10 > th dose independent rect. 3 23
367 105.38 wind 9.0 720 < th dose independent rect. 15 8
371 105.42 wind 3.0 30 < th dose dependent rect. 12 16
373 105.43 precipitation 0.1 720 < th dose independent rect. 3 8
374 105.43 precipitation 0.1 720 < th dose dependent rect. 3 8
381 105.49 wind 1.0 720 > th dose independent rect. 15 8
384 105.53 wind 3.0 30 < th dose dependent rect. 15 13
392 105.60 humidity 50.0 30 > th dose independent rect. 3 23
393 105.60 wind 3.0 30 < th dose dependent rect. 22 6
396 105.62 wind 1.0 30 > th dose independent rect. 23 8
399 105.63 radiation 1.0 14400 < th dose dependent rect. 3 1
406 105.66 wind 9.0 1440 < th dose independent rect. 3 1
407 105.66 temperature 10.0 1440 > th dose independent rect. 3 1
410 105.66 temperature 30.0 1440 < th dose independent rect. 3 1
414 105.66 humidity 50.0 1440 > th dose independent rect. 3 1
423 105.66 atmosphere 995.0 1440 > th dose independent rect. 3 1
424 105.66 radiation 1.0 1440 < th dose independent rect. 3 1
444 105.66 temperature 10.0 1440 > th dose independent rect. 4 23
447 105.66 radiation 1.0 1440 < th dose dependent rect. 3 1
464 105.68 radiation 10.0 30 < th dose independent rect. 3 23
468 105.73 wind 1.0 30 < th dose independent sin 16 NA
470 105.74 wind 1.0 30 > th dose independent rect. 18 13
471 105.74 radiation 10.0 10 < th dose dependent rect. 3 23
478 105.79 wind 1.0 30 > th dose independent rect. 16 15
480 105.80 wind 9.0 720 < th dose independent rect. 23 16
490 105.86 precipitation 0.1 720 < th dose independent rect. 23 16
491 105.86 precipitation 0.1 720 < th dose dependent rect. 23 16
495 105.89 precipitation 0.1 30 < th dose independent rect. 23 23
496 105.89 precipitation 0.1 30 < th dose dependent rect. 23 23
500 105.91 wind 1.0 30 > th dose independent rect. 3 23
503 105.95 temperature 20.0 30 < th dose independent rect. 7 1
506 105.95 temperature 20.0 30 < th dose dependent rect. 7 1
515 105.97 wind 3.0 30 < th dose dependent rect. 20 8
516 105.98 wind 9.0 720 < th dose independent rect. 11 16
533 106.07 atmosphere 995.0 720 > th dose independent rect. 15 8
543 106.11 radiation 1.0 1440 < th dose independent rect. 9 1
545 106.11 radiation 1.0 1440 < th dose dependent rect. 9 1
554 106.14 atmosphere 995.0 720 > th dose independent rect. 11 16
561 106.16 atmosphere 995.0 30 > th dose independent rect. 23 23
563 106.16 wind 1.0 30 > th dose dependent rect. 23 8
590 106.26 precipitation 0.1 1440 < th dose independent rect. 23 1
592 106.26 precipitation 0.1 1440 < th dose dependent rect. 23 1
603 106.31 radiation 10.0 30 < th dose independent rect. 23 23
645 106.42 radiation 1.0 1440 > th dose independent rect. 9 1
646 106.42 wind 1.0 30 > th dose independent rect. 14 17
663 106.45 temperature 10.0 30 > th dose dependent rect. 23 23
687 106.52 temperature 10.0 30 > th dose dependent rect. 3 23
699 106.54 wind 3.0 30 < th dose independent rect. 4 8
702 106.54 temperature 20.0 90 > th dose dependent rect. 3 5
707 106.55 atmosphere 1015.0 30 < th dose independent rect. 3 23
731 106.57 temperature 20.0 90 > th dose independent rect. 21 6
734 106.57 humidity 90.0 4320 < th dose dependent rect. 4 1
743 106.58 humidity 90.0 90 < th dose independent rect. 1 2
750 106.59 humidity 50.0 4320 > th dose dependent rect. 4 1
755 106.60 wind 1.0 30 > th dose independent rect. 12 19
769 106.60 radiation 20.0 10 < th dose dependent rect. 23 23
835 106.68 humidity 50.0 30 > th dose independent rect. 23 23
842 106.69 radiation 20.0 90 < th dose independent rect. 7 5
877 106.73 humidity 60.0 14400 > th dose independent rect. 4 4
879 106.73 humidity 80.0 4320 > th dose dependent rect. 3 5
882 106.73 temperature 10.0 90 > th dose dependent rect. 3 18
883 106.73 radiation 40.0 90 < th dose dependent rect. 7 20
884 106.74 radiation 30.0 14400 < th dose independent rect. 17 9
890 106.75 humidity 90.0 270 < th dose independent rect. 4 1
903 106.76 temperature 10.0 90 > th dose dependent rect. 21 6
907 106.76 radiation 40.0 270 < th dose dependent rect. 5 22
914 106.77 wind 3.0 30 < th dose dependent sin 15 NA
919 106.78 radiation 1.0 1440 > th dose independent rect. 4 1
927 106.78 radiation 30.0 14400 < th dose independent rect. 17 6
930 106.78 humidity 90.0 10 < th dose independent rect. 23 9
936 106.78 radiation 1.0 1440 > th dose dependent rect. 4 1
943 106.78 radiation 20.0 90 < th dose dependent rect. 7 5
974 106.81 radiation 40.0 90 < th dose dependent rect. 9 18
1000 106.84 temperature 25.0 10 > th dose independent rect. 24 22