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Os11g0689000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.03 (0.0297) R2 : 0.0682
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.361 (0.0625) R2dN8 : 0.0881 R2N8 : 0.0682
σ : 0.559
deviance : 143.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
104.62 0.481 5.29 -2.68 0.309 -58.2 -0.284 -118 0.202 18.2 14.89 1803 -- --
116.33 0.506 6.06 -0.746 0.308 -2.3 -0.263 -- 0.272 18.2 14.89 1803 -- --
104.79 0.477 5.29 -2.68 0.306 -58.2 -- -118 0.201 18.2 14.89 1815 -- --
105.56 0.479 6.07 -0.97 0.296 -2.72 -- -- 0.217 18.2 14.6 1884 -- --
109.6 0.488 5.28 -2.72 -- -58.1 -- -118 0.193 -- 14.88 1833 -- --
126.5 0.527 6.05 -0.655 0.309 -- -0.3 -- 0.296 17.5 -- -- -- --
126.71 0.527 6.05 -0.654 0.308 -- -- -- 0.295 17.7 -- -- -- --
110.57 0.49 6.07 -0.989 -- -2.71 -- -- 0.207 -- 14.66 1882 -- --
127.55 0.526 6.05 -- 0.315 -2.01 -- -- 0.331 18 14.6 1832 -- --
131.62 0.536 6.05 -0.664 -- -- -- -- 0.287 -- -- -- -- --
138 0.55 6.04 -- 0.318 -- -- -- 0.367 17.6 -- -- -- --
132.94 0.537 6.04 -- -- -2.02 -- -- 0.334 -- 14.6 1832 -- --
143.26 0.559 6.03 -- -- -- -- -- 0.361 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.05 humidity 90.0 14400 > th dose dependent rect. 9 1
2 101.48 precipitation 0.1 14400 < th dose independent rect. 6 2
3 101.48 precipitation 0.1 14400 < th dose dependent rect. 6 2
4 101.70 humidity 90.0 14400 > th dose dependent rect. 8 6
6 101.89 humidity 90.0 14400 > th dose dependent rect. 8 8
11 102.24 precipitation 0.1 14400 < th dose independent rect. 5 5
12 102.24 precipitation 0.1 14400 < th dose dependent rect. 5 5
14 102.38 humidity 90.0 14400 > th dose independent rect. 13 1
15 102.39 radiation 1.0 4320 < th dose dependent rect. 7 8
20 102.57 precipitation 0.1 14400 > th dose independent rect. 6 2
21 102.57 precipitation 0.1 14400 > th dose dependent rect. 6 2
23 102.63 humidity 90.0 4320 > th dose dependent rect. 12 2
25 102.65 precipitation 0.1 14400 < th dose independent rect. 6 10
27 102.65 precipitation 0.1 14400 < th dose dependent rect. 6 10
30 102.72 precipitation 0.1 14400 > th dose independent rect. 6 10
31 102.73 precipitation 0.1 14400 > th dose independent rect. 5 5
33 102.78 precipitation 0.1 14400 < th dose independent rect. 6 8
34 102.78 precipitation 0.1 14400 < th dose dependent rect. 6 8
36 102.84 precipitation 0.1 14400 > th dose independent rect. 6 8
39 102.88 humidity 80.0 1440 > th dose dependent rect. 10 1
40 102.88 precipitation 0.1 14400 > th dose dependent rect. 5 5
57 103.40 humidity 90.0 14400 > th dose independent rect. 9 1
59 103.45 humidity 80.0 43200 < th dose dependent rect. 23 8
62 103.48 humidity 80.0 43200 < th dose dependent rect. 23 1
64 103.51 humidity 80.0 43200 < th dose dependent rect. 4 3
70 103.55 wind 3.0 43200 < th dose independent rect. 6 1
78 103.63 wind 3.0 43200 > th dose independent rect. 6 1
79 103.63 temperature 20.0 14400 < th dose independent rect. 19 1
87 103.71 precipitation 0.1 14400 > th dose independent rect. 9 1
88 103.71 precipitation 0.1 14400 > th dose dependent rect. 9 1
91 103.73 precipitation 0.1 14400 < th dose independent rect. 9 1
92 103.73 precipitation 0.1 14400 < th dose dependent rect. 9 1
98 103.79 temperature 20.0 270 > th dose independent rect. 8 17
103 103.82 humidity 80.0 1440 > th dose independent rect. 10 1
111 103.90 temperature 20.0 30 > th dose independent rect. 9 17
149 104.15 temperature 20.0 14400 > th dose independent rect. 18 1
150 104.15 radiation 1.0 14400 < th dose dependent rect. 7 2
154 104.21 humidity 80.0 43200 < th dose independent rect. 1 1
155 104.22 temperature 20.0 90 > th dose independent rect. 21 17
161 104.24 precipitation 0.1 4320 > th dose independent rect. 4 3
162 104.24 temperature 20.0 10 > th dose independent rect. 21 18
172 104.35 radiation 1.0 4320 < th dose independent rect. 7 8
173 104.35 precipitation 0.1 14400 > th dose dependent rect. 5 8
184 104.44 radiation 1.0 4320 > th dose independent rect. 7 8
194 104.49 humidity 80.0 43200 < th dose independent rect. 24 7
213 104.62 humidity 90.0 14400 > th dose independent rect. 9 5
221 104.64 temperature 20.0 270 > th dose independent rect. 18 8
223 104.65 precipitation 0.1 4320 > th dose dependent rect. 4 3
225 104.66 humidity 50.0 14400 > th dose independent rect. 3 6
235 104.73 humidity 80.0 43200 > th dose independent rect. 1 1
244 104.79 humidity 80.0 43200 < th dose independent rect. 3 4
269 104.90 humidity 90.0 14400 > th dose dependent rect. 12 5
277 104.98 humidity 80.0 43200 > th dose independent rect. 5 1
282 104.99 wind 5.0 43200 < th dose dependent rect. 6 1
285 105.01 temperature 20.0 720 > th dose independent rect. 11 8
288 105.02 humidity 80.0 43200 > th dose independent rect. 1 6
294 105.05 humidity 80.0 43200 > th dose independent rect. 3 4
295 105.05 wind 1.0 43200 > th dose dependent rect. 5 2
310 105.10 temperature 15.0 4320 < th dose dependent rect. 6 4
315 105.12 temperature 25.0 720 < th dose dependent rect. 10 11
319 105.14 wind 3.0 43200 < th dose independent rect. 1 6
322 105.16 temperature 15.0 4320 < th dose dependent sin 1 NA
334 105.19 wind 3.0 43200 > th dose independent rect. 1 7
340 105.21 humidity 90.0 14400 < th dose independent rect. 12 2
347 105.23 humidity 90.0 14400 < th dose independent rect. 8 6
360 105.28 humidity 80.0 14400 < th dose independent rect. 10 1
361 105.28 humidity 50.0 14400 > th dose independent rect. 5 4
363 105.28 temperature 20.0 720 < th dose independent rect. 9 14
365 105.29 temperature 15.0 4320 < th dose independent rect. 4 3
384 105.34 temperature 20.0 720 < th dose independent rect. 10 11
421 105.46 temperature 15.0 4320 < th dose dependent rect. 5 12
424 105.47 humidity 90.0 720 > th dose dependent rect. 16 1
457 105.55 wind 1.0 14400 > th dose dependent rect. 23 6
463 105.57 radiation 1.0 14400 < th dose independent rect. 7 4
471 105.58 temperature 15.0 4320 < th dose dependent rect. 1 20
478 105.60 wind 1.0 43200 < th dose dependent rect. 12 1
501 105.66 temperature 20.0 720 < th dose independent sin 20 NA
511 105.68 humidity 50.0 14400 > th dose independent rect. 19 8
519 105.71 radiation 1.0 4320 > th dose independent rect. 7 3
520 105.71 wind 9.0 14400 < th dose independent rect. 5 6
533 105.73 precipitation 0.1 14400 > th dose dependent rect. 6 10
555 105.78 temperature 25.0 14400 < th dose dependent rect. 9 1
563 105.80 temperature 15.0 1440 > th dose independent rect. 9 18
564 105.80 humidity 90.0 14400 > th dose dependent sin 23 NA
587 105.85 humidity 80.0 1440 < th dose independent rect. 10 1
592 105.86 wind 9.0 14400 < th dose dependent rect. 23 6
602 105.88 temperature 15.0 4320 < th dose dependent rect. 22 17
611 105.90 temperature 20.0 270 > th dose independent rect. 18 19
624 105.91 temperature 15.0 4320 < th dose dependent rect. 4 15
644 105.95 temperature 20.0 1440 < th dose independent rect. 11 3
651 105.95 temperature 10.0 270 > th dose dependent rect. 18 8
671 105.98 temperature 15.0 4320 < th dose dependent sin 7 NA
725 106.05 wind 3.0 14400 > th dose dependent rect. 21 12
745 106.09 temperature 20.0 1440 < th dose independent rect. 15 2
769 106.14 temperature 20.0 1440 > th dose independent rect. 11 3
774 106.15 wind 5.0 43200 < th dose dependent rect. 23 8
777 106.16 temperature 20.0 90 < th dose dependent rect. 13 22
778 106.17 temperature 20.0 1440 < th dose independent rect. 13 4
793 106.19 temperature 20.0 720 > th dose independent sin 20 NA
823 106.23 temperature 15.0 1440 > th dose independent rect. 9 20
824 106.23 temperature 20.0 1440 < th dose dependent rect. 9 2
835 106.24 temperature 20.0 720 > th dose independent rect. 11 12
846 106.26 temperature 15.0 4320 < th dose independent rect. 6 1
888 106.33 temperature 15.0 1440 < th dose dependent rect. 4 3
896 106.34 temperature 15.0 4320 < th dose dependent rect. 20 11
908 106.36 precipitation 0.1 1440 < th dose independent rect. 10 3
913 106.36 precipitation 0.1 1440 < th dose dependent rect. 10 3
945 106.42 temperature 25.0 14400 < th dose dependent rect. 14 1
970 106.46 temperature 25.0 14400 < th dose dependent rect. 8 8