Os11g0687900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MLA10.
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Os11g0687900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MLA10.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.9 | 0.45 | 3.24 | 0.0807 | 0.23 | -1.14 | 0.311 | 3.02 | 0.058 | 9.54 | 50.38 | 8 | -- | -- |
| 94.1 | 0.452 | 3.23 | 0.0836 | 0.225 | -0.626 | 0.132 | -- | 0.0527 | 9.16 | 51.81 | 6 | -- | -- |
| 91.79 | 0.446 | 3.23 | 0.111 | 0.238 | -1.17 | -- | 2.91 | 0.0658 | 9.06 | 50.38 | 6 | -- | -- |
| 94.16 | 0.452 | 3.23 | 0.088 | 0.225 | -0.625 | -- | -- | 0.0526 | 9.11 | 51.83 | 6 | -- | -- |
| 94.7 | 0.453 | 3.24 | 0.096 | -- | -1.11 | -- | 2.7 | 0.0616 | -- | 50.5 | 6 | -- | -- |
| 98.96 | 0.466 | 3.23 | 0.0868 | 0.248 | -- | 0.113 | -- | 0.0278 | 10.1 | -- | -- | -- | -- |
| 99.01 | 0.466 | 3.23 | 0.0912 | 0.248 | -- | -- | -- | 0.028 | 10.1 | -- | -- | -- | -- |
| 97.08 | 0.459 | 3.23 | 0.0876 | -- | -0.657 | -- | -- | 0.0552 | -- | 51.51 | 6 | -- | -- |
| 94.37 | 0.452 | 3.23 | -- | 0.225 | -0.625 | -- | -- | 0.043 | 9.08 | 51.85 | 6 | -- | -- |
| 102.71 | 0.474 | 3.24 | 0.0879 | -- | -- | -- | -- | 0.0277 | -- | -- | -- | -- | -- |
| 99.23 | 0.466 | 3.24 | -- | 0.247 | -- | -- | -- | 0.0178 | 10.1 | -- | -- | -- | -- |
| 97.28 | 0.459 | 3.24 | -- | -- | -0.657 | -- | -- | 0.0456 | -- | 51.37 | 6 | -- | -- |
| 102.92 | 0.474 | 3.24 | -- | -- | -- | -- | -- | 0.0179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.02 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 2 | 86.09 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 34 | 86.18 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 87 | 86.36 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 140 | 86.89 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 22 | NA |
| 168 | 87.14 | atmosphere | 1010 | 30 | > th | dose dependent | rect. | 24 | 13 |
| 292 | 87.24 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 409 | 87.35 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 545 | 87.81 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 658 | 88.87 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 668 | 88.87 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 678 | 88.89 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 679 | 88.89 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 702 | 89.20 | humidity | 50 | 10 | > th | dose independent | sin | 4 | NA |
| 713 | 89.47 | humidity | 50 | 10 | > th | dose independent | sin | 8 | NA |
| 720 | 89.48 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 728 | 89.64 | humidity | 60 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 732 | 89.66 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 755 | 89.93 | humidity | 60 | 270 | < th | dose independent | rect. | 19 | 19 |
| 756 | 89.95 | humidity | 60 | 270 | < th | dose independent | rect. | 9 | 5 |
| 758 | 89.97 | atmosphere | 1010 | 30 | > th | dose independent | rect. | 11 | 1 |
| 821 | 90.09 | humidity | 60 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 839 | 90.21 | radiation | 10 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 854 | 90.29 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 932 | 90.58 | humidity | 60 | 270 | < th | dose independent | sin | 7 | NA |
| 933 | 90.58 | wind | 1 | 720 | < th | dose independent | rect. | 7 | 1 |
| 937 | 90.62 | humidity | 50 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 958 | 90.71 | humidity | 60 | 270 | < th | dose independent | rect. | 10 | 1 |
| 964 | 90.79 | wind | 9 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 973 | 90.85 | humidity | 70 | 4320 | > th | dose independent | rect. | 4 | 3 |