Os11g0685600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WRKY transcription factor 41.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0685600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to WRKY transcription factor 41.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.66 | 0.514 | 7.72 | -0.425 | 1.53 | -0.337 | -1.37 | -0.829 | 0.272 | 13.3 | 24.98 | 263 | -- | -- |
| 122.22 | 0.515 | 7.73 | -0.598 | 1.47 | -0.381 | -1.3 | -- | 0.268 | 13.1 | 25.2 | 257 | -- | -- |
| 126.56 | 0.524 | 7.74 | -0.59 | 1.55 | -0.313 | -- | -0.391 | 0.24 | 13.5 | 24.82 | 266 | -- | -- |
| 124.48 | 0.523 | 7.73 | -0.709 | 1.45 | -0.369 | -- | -- | 0.296 | 13.7 | 27.2 | 272 | -- | -- |
| 208.54 | 0.676 | 7.8 | -0.951 | -- | -0.976 | -- | 0.278 | 0.0233 | -- | 25.9 | 13 | -- | -- |
| 128.88 | 0.532 | 7.71 | -0.576 | 1.69 | -- | -1.01 | -- | 0.37 | 13.8 | -- | -- | -- | -- |
| 132.8 | 0.54 | 7.71 | -0.607 | 1.69 | -- | -- | -- | 0.365 | 13.8 | -- | -- | -- | -- |
| 207.7 | 0.671 | 7.79 | -1.04 | -- | -1.05 | -- | -- | 0.13 | -- | 27 | 24 | -- | -- |
| 137.32 | 0.549 | 7.71 | -- | 1.51 | -0.287 | -- | -- | 0.388 | 13.7 | 27.2 | 272 | -- | -- |
| 306.33 | 0.818 | 7.73 | -0.677 | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
| 142.52 | 0.558 | 7.7 | -- | 1.7 | -- | -- | -- | 0.433 | 13.9 | -- | -- | -- | -- |
| 229.5 | 0.706 | 7.76 | -- | -- | -0.994 | -- | -- | 0.264 | -- | 26.9 | 25 | -- | -- |
| 318.41 | 0.833 | 7.72 | -- | -- | -- | -- | -- | 0.401 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.85 | temperature | 20.0 | 30 | > th | dose independent | rect. | 23 | 18 |
| 2 | 111.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 5 | 111.68 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 23 | 113.45 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 30 | 113.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 39 | 114.18 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 45 | 114.27 | temperature | 10.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 46 | 114.27 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 47 | 114.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 48 | 114.28 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 52 | 114.35 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 12 |
| 56 | 114.41 | wind | 3.0 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 62 | 114.47 | wind | 3.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 75 | 114.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 80 | 114.60 | temperature | 10.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 82 | 114.63 | temperature | 10.0 | 10 | > th | dose dependent | sin | 22 | NA |
| 118 | 114.86 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 128 | 114.91 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 130 | 114.92 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 140 | 114.99 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 143 | 115.02 | temperature | 10.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 201 | 115.32 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 6 |
| 216 | 115.36 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 230 | 115.42 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 235 | 115.45 | humidity | 60.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 251 | 115.49 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 254 | 115.50 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 273 | 115.56 | temperature | 25.0 | 270 | < th | dose independent | sin | 5 | NA |
| 274 | 115.56 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 280 | 115.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 11 |
| 286 | 115.60 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 291 | 115.60 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 292 | 115.61 | wind | 3.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 297 | 115.62 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 298 | 115.62 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 300 | 115.62 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 318 | 115.67 | wind | 3.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 335 | 115.72 | wind | 9.0 | 90 | < th | dose independent | rect. | 23 | 18 |
| 344 | 115.74 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 347 | 115.76 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 352 | 115.76 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 366 | 115.80 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 380 | 115.83 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 400 | 115.88 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 24 | 2 |
| 429 | 115.93 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 14 |
| 431 | 115.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 433 | 115.94 | wind | 5.0 | 90 | < th | dose independent | rect. | 16 | 7 |
| 436 | 115.94 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 16 | 7 |
| 449 | 115.97 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 456 | 115.98 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 472 | 116.01 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 17 |
| 475 | 116.02 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 492 | 116.05 | wind | 1.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 499 | 116.06 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 23 | 18 |
| 512 | 116.08 | radiation | 1.0 | 10 | < th | dose independent | rect. | 16 | 7 |
| 568 | 116.15 | humidity | 60.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 571 | 116.15 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 594 | 116.18 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 23 |
| 600 | 116.19 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 606 | 116.19 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 638 | 116.23 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 639 | 116.23 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 652 | 116.24 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 654 | 116.25 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 692 | 116.30 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 719 | 116.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 726 | 116.34 | wind | 7.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 727 | 116.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 743 | 116.36 | wind | 5.0 | 43200 | < th | dose dependent | sin | 13 | NA |
| 748 | 116.36 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 772 | 116.39 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 781 | 116.40 | humidity | 70.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 795 | 116.41 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 6 |
| 801 | 116.41 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 6 |
| 808 | 116.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 821 | 116.43 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 825 | 116.44 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 18 |
| 833 | 116.44 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 849 | 116.46 | temperature | 30.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 857 | 116.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 883 | 116.48 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 16 | 15 |
| 887 | 116.49 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 895 | 116.49 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 913 | 116.50 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 6 | 17 |
| 934 | 116.52 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 937 | 116.52 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 3 |
| 967 | 116.55 | wind | 7.0 | 14400 | > th | dose independent | rect. | 22 | 20 |
| 973 | 116.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 974 | 116.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 17 | 6 |