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Os11g0685200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.22 (0.0272) R2 : 0.626
β1 : -0.823 (0.0995) R2dD : 0.0583 R2D : 0.0542
β2 : 1.38 (0.0714) R2dC : 0.312 R2C : 0.223
β3 : -1.14 (0.0573) R2dE : 0.333 R2E : 0.244
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.136 (0.058) R2dN8 : 0.00607 R2N8 : 0.0121
σ : 0.508
deviance : 118.99
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C
peak time of C : 5.48
E
wheather : radiation
threshold : 22.02
memory length : 10
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.62 0.512 8.22 -0.816 1.38 -1.15 0.176 0.228 0.138 5.46 22.02 10 -- --
118.89 0.508 8.22 -0.82 1.38 -1.15 0.199 -- 0.138 5.45 22.01 10 -- --
118.7 0.507 8.22 -0.816 1.38 -1.15 -- 0.237 0.137 5.46 22.02 10 -- --
118.99 0.508 8.22 -0.823 1.38 -1.14 -- -- 0.136 5.48 22.02 10 -- --
208.83 0.677 8.24 -0.74 -- -0.935 -- 0.074 0.16 -- 8.518 8 -- --
142.49 0.56 8.19 -0.783 1.67 -- 0.0485 -- 0.156 8.33 -- -- -- --
142.49 0.559 8.19 -0.782 1.67 -- -- -- 0.156 8.33 -- -- -- --
208.6 0.673 8.25 -0.766 -- -0.944 -- -- 0.149 -- 8.648 6 -- --
136.77 0.545 8.2 -- 1.36 -1.12 -- -- 0.22 5.51 20.62 12 -- --
297.01 0.805 8.24 -0.771 -- -- -- -- 0.174 -- -- -- -- --
158.6 0.589 8.18 -- 1.66 -- -- -- 0.243 8.37 -- -- -- --
221.8 0.694 8.22 -- -- -0.966 -- -- 0.24 -- 8.88 4 -- --
312.71 0.825 8.22 -- -- -- -- -- 0.259 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 116.61 radiation 10 10 < th dose dependent sin 0 NA
5 118.71 radiation 20 10 < th dose dependent rect. 13 23
6 118.75 radiation 20 10 < th dose dependent rect. 11 23
7 118.85 radiation 20 10 < th dose dependent no NA NA
8 119.10 radiation 20 10 < th dose dependent rect. 15 23
49 121.23 radiation 30 90 < th dose dependent rect. 23 23
56 121.53 radiation 20 10 < th dose dependent rect. 23 23
72 121.92 radiation 20 10 < th dose dependent rect. 21 23
75 121.99 radiation 10 10 > th dose independent rect. 9 23
77 122.03 radiation 10 90 > th dose independent sin 1 NA
80 122.08 radiation 20 10 < th dose dependent rect. 7 23
85 122.13 radiation 40 720 < th dose independent rect. 21 23
90 122.19 radiation 40 720 < th dose independent rect. 6 16
91 122.19 radiation 10 90 > th dose independent rect. 17 23
93 122.21 radiation 30 30 < th dose dependent rect. 2 18
108 122.41 radiation 40 720 > th dose dependent rect. 12 23
118 122.57 radiation 40 720 < th dose independent rect. 7 14
146 122.91 radiation 40 720 < th dose independent rect. 23 23
151 122.97 radiation 10 90 > th dose independent rect. 6 10
168 123.02 radiation 40 720 < th dose independent rect. 15 23
194 123.25 radiation 40 720 < th dose independent sin 22 NA
199 123.31 humidity 90 10 < th dose dependent rect. 20 20
205 123.35 radiation 20 10 < th dose dependent rect. 7 13
206 123.36 radiation 20 270 < th dose dependent rect. 23 19
213 123.42 humidity 90 90 < th dose dependent rect. 20 19
216 123.47 radiation 1 30 > th dose dependent rect. 9 23
220 123.52 radiation 30 10 < th dose dependent rect. 24 20
225 123.58 radiation 40 720 > th dose independent rect. 12 23
229 123.63 radiation 40 720 < th dose independent rect. 9 10
232 123.65 radiation 10 90 > th dose independent rect. 9 7
248 123.78 humidity 70 10 > th dose independent rect. 2 18
250 123.79 radiation 20 10 < th dose dependent rect. 19 23
254 123.81 radiation 40 720 < th dose independent no NA NA
261 123.90 radiation 10 90 > th dose independent rect. 9 23
262 123.90 radiation 1 30 > th dose dependent rect. 17 23
271 124.00 radiation 30 30 < th dose independent rect. 2 18
291 124.11 radiation 1 30 > th dose dependent rect. 5 11
323 124.23 radiation 1 30 > th dose dependent no NA NA
324 124.23 radiation 1 30 > th dose dependent rect. 5 14
394 124.27 radiation 40 720 < th dose independent rect. 8 12
402 124.37 radiation 30 720 > th dose dependent sin 22 NA
403 124.37 radiation 30 720 > th dose dependent no NA NA
404 124.37 radiation 30 720 > th dose dependent rect. 7 9
527 124.41 radiation 40 1440 > th dose dependent rect. 14 21
530 124.43 radiation 10 10 > th dose independent sin 23 NA
546 124.44 radiation 30 30 < th dose dependent rect. 2 16
580 124.53 radiation 40 720 > th dose independent rect. 8 7
599 124.54 radiation 40 720 > th dose independent no NA NA
737 124.55 radiation 40 720 > th dose independent sin 23 NA
759 124.59 humidity 70 10 > th dose independent rect. 2 16
784 124.63 radiation 40 720 > th dose independent rect. 14 23
814 124.68 radiation 40 720 < th dose independent rect. 2 23
818 124.69 radiation 40 720 < th dose independent rect. 10 8
819 124.69 radiation 40 90 < th dose independent rect. 23 23
828 124.72 radiation 40 1440 > th dose dependent rect. 9 2
892 124.75 radiation 30 720 > th dose dependent rect. 14 23
936 124.80 radiation 30 30 < th dose dependent rect. 11 9
967 124.83 radiation 40 720 < th dose independent rect. 4 23