Os11g0684600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR type resistance protein (Fragment).
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Os11g0684600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR type resistance protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 239.18 | 0.727 | 5.41 | 0.248 | 1.61 | -3.7 | 0.352 | 2.02 | -0.137 | 20 | 16.1 | 351 | -- | -- |
| 241.89 | 0.724 | 5.45 | -0.0772 | 1.59 | -3.72 | 0.686 | -- | -0.229 | 20.1 | 15.4 | 351 | -- | -- |
| 239.5 | 0.721 | 5.41 | 0.27 | 1.62 | -3.69 | -- | 2.22 | -0.127 | 20 | 16.2 | 351 | -- | -- |
| 242.88 | 0.726 | 5.45 | -0.0932 | 1.57 | -3.76 | -- | -- | -0.231 | 19.8 | 15.5 | 316 | -- | -- |
| 298.01 | 0.804 | 5.42 | -0.193 | -- | -3.41 | -- | 0.566 | -0.294 | -- | 15.4 | 11 | -- | -- |
| 406.51 | 0.945 | 5.56 | -0.915 | 1.02 | -- | 0.752 | -- | -0.798 | 23 | -- | -- | -- | -- |
| 408.85 | 0.947 | 5.56 | -0.945 | 1.02 | -- | -- | -- | -0.8 | 22.9 | -- | -- | -- | -- |
| 298.01 | 0.804 | 5.43 | -0.282 | -- | -3.34 | -- | -- | -0.316 | -- | 15.3 | 9 | -- | -- |
| 243.11 | 0.726 | 5.45 | -- | 1.57 | -3.81 | -- | -- | -0.217 | 19.8 | 15.4 | 316 | -- | -- |
| 473.41 | 1.02 | 5.53 | -0.923 | -- | -- | -- | -- | -0.793 | -- | -- | -- | -- | -- |
| 432.37 | 0.973 | 5.54 | -- | 1.01 | -- | -- | -- | -0.694 | 22.8 | -- | -- | -- | -- |
| 300.02 | 0.807 | 5.42 | -- | -- | -3.46 | -- | -- | -0.282 | -- | 15.3 | 8 | -- | -- |
| 495.88 | 1.04 | 5.51 | -- | -- | -- | -- | -- | -0.69 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 4 | 234.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 5 | 234.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 22 |
| 18 | 236.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 33 | 240.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 43 | 240.80 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 57 | 241.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 13 |
| 59 | 241.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 63 | 241.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 81 | 242.28 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 86 | 242.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 107 | 242.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 111 | 242.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 160 | 243.43 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 216 | 243.89 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 324 | 244.93 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 395 | 245.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 802 | 249.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 853 | 250.20 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 932 | 250.96 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |